| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0236 |
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| Symbol | |
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| ID | 5104260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 196271 |
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| End bp | 196900 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506142 |
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| Product | hexulose-6-phosphate isomerase |
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| Protein accession | YP_001190337 |
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| Protein GI | 146303021 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
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| TIGRFAM ID | [TIGR03127] 6-phospho 3-hexuloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.249011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGCCTC CATCATCTAT CAATCTTCCT CTTAGTCTCA AGACCATGTA TGACATCGCG
GAATTTATCT TGAGGTCTGT GGAACTCATA AGCCCTGATC AAACCGAGAA AATGGTAGAT
ACGCTAGCTA GGTTTTACGA GAACAAGGGA GGCAAAGTTC TTGTCATGGG GGCTGGGAGG
AGTGGACTTG TAGGCAGGGC CTTTGCCATG AGGCTTCTTC ATTTAGGGTA TAATGCTTAT
GTCCTGGGTG AAACCATAGT CCCAGCCATA AGGGAGAACG ATCTAGCTAT AGCCATATCT
GGATCAGGAA GAACCAAGCT AATAGTTACT GCAGCTGAGG CAGCAAAGGA TGCTAAGGCA
ACCCTGGTAG CCTTAACCAG CTATTACGAT AGCCCCCTTG GGAGGATTGC AGATGTGGTG
GTGGAGATTC CTGGAAGAAC CAAATACTCT CAAAATGAGG ATTACTTCGC TAGGCAAATC
TTAGGTATAA CCGAACCTCT AGCACCTCTT GGTACACTGT TTGAGGACAC TACCCAGGTC
TTCCTAGATG GTATAGTAGC TGAATTAATG ATGAGATTGA AGAAGACAGA GGAAGATCTT
AGGAGAGTTC ATGCCAATAT AGAGCTCTAA
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| Protein sequence | MEPPSSINLP LSLKTMYDIA EFILRSVELI SPDQTEKMVD TLARFYENKG GKVLVMGAGR
SGLVGRAFAM RLLHLGYNAY VLGETIVPAI RENDLAIAIS GSGRTKLIVT AAEAAKDAKA
TLVALTSYYD SPLGRIADVV VEIPGRTKYS QNEDYFARQI LGITEPLAPL GTLFEDTTQV
FLDGIVAELM MRLKKTEEDL RRVHANIEL
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