| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0231 |
|---|
| Symbol | |
|---|
| ID | 5104097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 190846 |
|---|
| End bp | 192063 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640506136 |
|---|
| Product | S-adenosylmethionine synthetase |
|---|
| Protein accession | YP_001190332 |
|---|
| Protein GI | 146303016 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1812] Archaeal S-adenosylmethionine synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00947715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA TCAACATTGA GTCATTTAGA ACTTTGGAAC CAGATTCCTT ACCTGTAGAA
TTGGCCGAAA GGAAAGGAAC AGGACACCCA GACTACATAG CTGATTCAGC CTCAGAAGAG
GCTAGCAGGA AGCTATCGCT TTACTACCTA AAGACATACG GAACTATACT TCATCATAAC
TTGGATAAGA CCCTTCTTGT AGGAGGTCAG GCCTCTCCAA AATTCAAGGG CGGAGATGTC
ATTCATCCTA TTTACATTGT GGTAGCTGGT AGAGCCACTA CAGAAGTGAG GACCAATGAT
GGCGTGGATA ACGTTCCAGT GGGTACAATA ATCGTCGAGA GCGTCAAGAA CTGGATAAGG
GAGAATTTCA GGTATCTAGA TGCGGAGAAG CACGTTATAG TTGATTATAA GATAGGAAAG
GGTTCAGCGG ATTTGGTGGG CATATTTGAC AAGGGCAGGA AATCAGTTCC TCTCTCCAAT
GATACAAGTT TTGGAGTAGG TTTCGCACCT TACTCGAAGC TGGAACAGTT AGTATTCCAG
ACAGAGAGAA TGCTCAACTC TAAGAAGGTG AAGACCGAGC TTCCGGAGGT TGGTGAGGAC
ATAAAGGTGA TGGGACTCAG GAGAGGGAAG GAGGTCACGC TTACCATAGC CATGGCAGCC
ATAAGTCCCC TCATTGAGGA TAAGAACCAC TATATCTCCG TGAAGGAACA GGTAAAGGAA
AAGGTACTGG ATCTAGCCTC TCAAATAGCT CCGGATCTTA GCGTTAAAGT AAACGTGAAC
ACAGGTGATA GGGAAGACCA GGGAATACTT TATCTAACCG TAACTGGCAC CTCAGCTGAG
CATGGAGATG ACGGGATGAC TGGGAGAGGA AACAGGGGTA TAGGGCTCAT AACTCCCATG
AGGCCAATGT CTCTTGAGGC GACTGCTGGT AAGAATCCAG TTAATCACGT GGGTAAGCTC
TACAACATAG TGGCTAACCT TATTGCTAAG AAGGCCTCAG AGCAGGTTAA GGATGTTAGG
AACGTGCAGA TAGAGGTTCT GGGTCAAATA GGTAGGCCAA TAAACGACCC TCTCATTGTC
AACGTGGAAG TTGCGACTCA TTCTGGAACC ATAACATCTG ATACAAAGGC CGAGATATCA
GGAATTGCAG AGGAGTATTT AGATTCATTC GACAAGATAA CCCAAATGAT ACTTGAAGGA
AAGGTTATGC TATTCTAG
|
|---|
| Protein sequence | MKNINIESFR TLEPDSLPVE LAERKGTGHP DYIADSASEE ASRKLSLYYL KTYGTILHHN
LDKTLLVGGQ ASPKFKGGDV IHPIYIVVAG RATTEVRTND GVDNVPVGTI IVESVKNWIR
ENFRYLDAEK HVIVDYKIGK GSADLVGIFD KGRKSVPLSN DTSFGVGFAP YSKLEQLVFQ
TERMLNSKKV KTELPEVGED IKVMGLRRGK EVTLTIAMAA ISPLIEDKNH YISVKEQVKE
KVLDLASQIA PDLSVKVNVN TGDREDQGIL YLTVTGTSAE HGDDGMTGRG NRGIGLITPM
RPMSLEATAG KNPVNHVGKL YNIVANLIAK KASEQVKDVR NVQIEVLGQI GRPINDPLIV
NVEVATHSGT ITSDTKAEIS GIAEEYLDSF DKITQMILEG KVMLF
|
|---|
| |