Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0230 |
Symbol | |
ID | 5104096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 190549 |
End bp | 190812 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640506135 |
Product | like-Sm ribonucleoprotein, core |
Protein accession | YP_001190331 |
Protein GI | 146303015 |
COG category | [K] Transcription |
COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00778138 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGCAGGCAA AGGTAGAGAA TCCTTTGAAA AGCCTAAGGA TGGCTACAAA CAAGATTGTC CTTGTTAAGC TGAAGGACGG TTCTGAGTAT ATAGGTAAAA TGGAACAATC AGATGGGACT ATGAACCTGG TTCTAAGGGA CTGCACAGAA ATGAGGGAAG GTACTGCGGA CCCCATAGCG AAGTATGGCA GAGTCTTAAT ACGTGGTAGT AATATTCTAT TTATCAGTGT GGATTACGAG AACATCATTA ACACGGGCAA GTAA
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Protein sequence | MQAKVENPLK SLRMATNKIV LVKLKDGSEY IGKMEQSDGT MNLVLRDCTE MREGTADPIA KYGRVLIRGS NILFISVDYE NIINTGK
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