Gene Msed_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0229 
Symbol 
ID5104095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp190140 
End bp190472 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content47% 
IMG OID640506134 
Productregulatory protein, ArsR 
Protein accessionYP_001190330 
Protein GI146303014 
COG category[K] Transcription 
COG ID[COG4189] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00808889 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAATAAAG TGAAAAATAT ATTCTCCATG GAACTGGTGG TCTCTGACGT TGAGGACGTA 
GTTAGAGTCA CTGAGGCTCT CTCATCCGTT ACCAGGGTCA ACATTCTCAG ACTGATAGCC
GAGGGGGAAA AGAGCATCAC GGACCTGAGC GAAGAACTGC ATATGACTAA GGGAAACGTT
AGCTCTCAAG TTGCGTTACT GGAGAGCTCA GGGTTAGTGG AGGTGAGATA CACCGAGGGA
AACAAGGGGT TGAAAAAATT GATCAAAGCC AAGTACTCCA GGATAATTAT CTCCCTAGTT
CCCGACGACG GCCCTGAGGA AACCAAGGAA TAG
 
Protein sequence
MNKVKNIFSM ELVVSDVEDV VRVTEALSSV TRVNILRLIA EGEKSITDLS EELHMTKGNV 
SSQVALLESS GLVEVRYTEG NKGLKKLIKA KYSRIIISLV PDDGPEETKE