| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0220 |
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| Symbol | |
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| ID | 5104086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 180729 |
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| End bp | 182330 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640506125 |
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| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
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| Protein accession | YP_001190321 |
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| Protein GI | 146303005 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3379] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000131562 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0129038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGTTT TATTGGTTGT TGTGGACGGG CTGGCCTATC ATTTAATGGA GAGATTCATA
GATCAACTTC CCACTATTCA GGAGATGGCG GAGGAAGGGG TGTATGGTCC CCTTGAGAGC
ACTTTCCCGT CCATAACCCC TGTGGCTTTA GCCTCTCTTT TCACTGGGGT ATCACCAAAG
GTTCACGGTG TTGTAGCCCC CAGAATATTC GTGAAGGGAA GAAAGATTCA GTCTAGCATA
TCTGCCTTTT CCAGTAGCTC ACTCATGGTA GACCCTATCT GGGCTACGCT GGGAAGGAAA
GGTTACAAGG TTGTGATAAC CTCTGCTCCT CAGGCCTTAC CAGATAAATG GAAACTAGAT
AATGTGATTC TGTTCGATCC ATACAAGGCC AAGGTTAAGA GATGCTCCGA GGGAACCCTC
CTCAAGGAGG GCGAAAACGA GTTTATTGGA AAGAAGTGGA GCGTAAAGGT AGAGGACCAG
ATTTACCTTG TGGGAGTGGA AGGACAAGAA TTCAAAGTGG AGATGGGGTC ATGGATTGGA
CCTCTGGAAG TAAACGGAAA GTGCGGAGAG GAAGAGTTGA AGGCTTCTAT CTTTCTTCAT
GCAACTCCCC GTGGAGTATA TGTAACTCCG CCAGCCTTTC TGAACTTTAA GTGGGGAAAC
AACAGGGACC TTCTCCTTGA GGTTTGGGAG AATGTAGTCA AGAAAGTTGG AATGTTGCTG
GACGGTGATT ATAAGGGATT AAACAAGGGC CTAATCACGT TCGATGAGTA TTTAAAGACA
GCTGAACTCT CCTTTAACTT TTTCGTGGAA TACTCGCTCT ACCTCCTTAG GAGAAGCGAT
TGGGATTTTG GAGTCACCTA TCTTCCGATA GTGGATAATC TTCAGCACCT TTTGTATGGC
GTGGATGATG GGAAGGCACT AGAGCACATT TTTCAGGCTT ACAAAATGGC TGATAAGTTT
CTAATGTTGC ATAGGAGTTT AGCAGAAAAT ATATTCCTTT GTTCCGACCA CGGAATAACA
AAAATAAAGA AGAGAGTCTA TGTCAATAAA ATATTGGAGA GGTTAAACGT GTTGAAAATG
GACGACGGTA AAATAAACTG GGGGAAAACT AAGGCCTACT ATGGCGGGGG AGGCTTAATC
AGGATAAACC TTAAAGATAG GGAGGAAGCC GGCGTGGTCT ATCCGAAGGA GTATCAGAAG
CTGGTAAGGT ATATCGTGAA AAACCTAGAG GATCTTAAGG ACGATGATGG TGAATCCATT
TTCACGGGTA TTTACATGAG GGACACTCCT GCCTCAGACA GACAGGGTGA CATTGAGCTT
AGCATTAGGG ACTATTATTC GCTCAGTTCC AACGTTGATC ATGAGAACGA GATAGATACC
GTGAAACCCT ATTCCACTTC CACGGGAGAT CACGGGTTTT ACAGGAAGGA GGACCTTTAT
GGAGTGATCC TAGGAATAGG ACCCAAAATA GCCAGGGGTA AGAAGATAAA GGCCAAGATC
GTCGACATAG CTCCCACAAT CCTGAAGATT ATGGACGTTC AAGGTCCTAA GATGGAGGGA
AGGGTCCTAG TGGAGGCCCT GAGTAATGGA GGTCAGGAGT AA
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| Protein sequence | MKVLLVVVDG LAYHLMERFI DQLPTIQEMA EEGVYGPLES TFPSITPVAL ASLFTGVSPK
VHGVVAPRIF VKGRKIQSSI SAFSSSSLMV DPIWATLGRK GYKVVITSAP QALPDKWKLD
NVILFDPYKA KVKRCSEGTL LKEGENEFIG KKWSVKVEDQ IYLVGVEGQE FKVEMGSWIG
PLEVNGKCGE EELKASIFLH ATPRGVYVTP PAFLNFKWGN NRDLLLEVWE NVVKKVGMLL
DGDYKGLNKG LITFDEYLKT AELSFNFFVE YSLYLLRRSD WDFGVTYLPI VDNLQHLLYG
VDDGKALEHI FQAYKMADKF LMLHRSLAEN IFLCSDHGIT KIKKRVYVNK ILERLNVLKM
DDGKINWGKT KAYYGGGGLI RINLKDREEA GVVYPKEYQK LVRYIVKNLE DLKDDDGESI
FTGIYMRDTP ASDRQGDIEL SIRDYYSLSS NVDHENEIDT VKPYSTSTGD HGFYRKEDLY
GVILGIGPKI ARGKKIKAKI VDIAPTILKI MDVQGPKMEG RVLVEALSNG GQE
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