Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0219 |
Symbol | |
ID | 5104085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 180465 |
End bp | 180728 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640506124 |
Product | hypothetical protein |
Protein accession | YP_001190320 |
Protein GI | 146303004 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000254454 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0235176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATGACG TTCGAGACCT ATTACTTAAG GTGCTCAGGA AAATAGATCC CACCATCATT GAGGACACTG TGGATATCAA GTTTATACAG AACTTCAAGG ACAGATATGA CGTGTTCGGC CAGTTCAAGA ATGCCAAGGG GATTTACGAA TTTGCGGTGA GCTTTGATAA CAAGGGAAAT ATTAAGAGAG AACACGTTAA CATGATAGTC CCTCATAAGG TTAGAGATGA TATTGAACGT AAAGTTTACG ATAAAGGTGA TTGA
|
Protein sequence | MDDVRDLLLK VLRKIDPTII EDTVDIKFIQ NFKDRYDVFG QFKNAKGIYE FAVSFDNKGN IKREHVNMIV PHKVRDDIER KVYDKGD
|
| |