| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0215 |
|---|
| Symbol | |
|---|
| ID | 5104081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 176688 |
|---|
| End bp | 177698 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640506120 |
|---|
| Product | delta-aminolevulinic acid dehydratase |
|---|
| Protein accession | YP_001190316 |
|---|
| Protein GI | 146303000 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000475247 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0306727 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGGAT ATCCCAAGAT AAGACCAAGG AGATTAAGAC AGAACAAGAA TATAAGGGAC
GCAGTAGCGG AGACGAAACT GACTCATGAT AACCTAATCT TACCCATCTT TGTTAAGGAG
GGTATATCTA AGCCCGAGGA AATTTCCTCA ATGCCTGACG TTTATAGGTA CCCTGTGGGT
GATCCCCTAA TTAAGTTCGT AGAGGGGAAT TATTCCAAGG GAATAAGGAA GGTTATCCTG
TTCGGGATTC CATCCTTCAA GGATAACATA GCGAGCTCCG CATATCAGAA GGATGGAGTA
ATTCAGAGGT CGTTAAAGCT ATTGAAGGAA ACATTTGGAG ACAAGATACT TCTCTTCGCA
GACGAATGCA CTGACGAGTA CACTAGTCAT GGACACTGTG GGATAGTGAA TTACAGGGGG
AAACAATATT ACATTGACAA CGATGAGAGC TTGAAGGTCC ACGCGAAGAT AGCCCTGTCT
CAAGCCGAGG CAGGTGCCGA CGTGATTGCA CCCTCTAGCA TGATGGATGG AGTTGTTGGC
GCCATTAGGG AAGAGCTTGA CAGAAATGGC TTTACTGATA CCCTTATCAT GTCTTATAGC
GTGAAGTACG CCTCAGTCTT CTATTCCCCG TTTAGAGAGG CAGCCAGCTC AGCCCCTGCA
TTTGGGGACA GGAAAAGCTA CCAGATGGAC CCACGAAACG CCAACGAGGC GATAAAGGAG
GCCAGATTGG ACTTAGAGGA GGGGGCTGAT ATACTTATGG TGAAACCGGC CCACACTTAC
CTAGACGTGA TAAGGCTGGT AAAGGAGACC TATCCCGAAT ATCCCCTAGC AGCATATCAT
GTTAGCGGAG AGTATTCCAT GATCAAGGCC GCGGCCATAA ACGGTTGGTT GAACGAGAAG
GTGGCCGTCC TCGAGATCAC TCACGCCATT AGGCGTGCGG GGGCTGATAT GATCCTGACC
TATTACGCTC CAAAACTGGC AGAGTGGATT TTGGAGGCGA GTCCGTTTTG A
|
|---|
| Protein sequence | MVGYPKIRPR RLRQNKNIRD AVAETKLTHD NLILPIFVKE GISKPEEISS MPDVYRYPVG
DPLIKFVEGN YSKGIRKVIL FGIPSFKDNI ASSAYQKDGV IQRSLKLLKE TFGDKILLFA
DECTDEYTSH GHCGIVNYRG KQYYIDNDES LKVHAKIALS QAEAGADVIA PSSMMDGVVG
AIREELDRNG FTDTLIMSYS VKYASVFYSP FREAASSAPA FGDRKSYQMD PRNANEAIKE
ARLDLEEGAD ILMVKPAHTY LDVIRLVKET YPEYPLAAYH VSGEYSMIKA AAINGWLNEK
VAVLEITHAI RRAGADMILT YYAPKLAEWI LEASPF
|
|---|
| |