| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0196 |
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| Symbol | |
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| ID | 5103940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 159566 |
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| End bp | 160582 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640506101 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001190297 |
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| Protein GI | 146302981 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.583804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0665338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCA TTATCATGGA GGGAGGAAAG GCAGTACTCA AGGAAGTCCC AATTCCCAAG
CTGGGTCAGG GCGACGTCCT TGTGGAGATG AAGGCATGTG GACTTTGTGG AACAGATATA
GAGAAAATGT GCGGACAATA CACGGCCTCT CAACCCATAC TGGGACACGA GCCCGCTGGG
GTAGTAGCCG AATCCATGTC AGACGCAGTT AAGCCTGGGG ATAGGGTATT CGCACATCAT
CACGTCCCAT GTTACGAATG TTATTACTGT AAGAAGGGAA GCCCTACCAT GTGCCCGTAT
TATAGGAAGA CGAACTTAGA TCCTGGGGGC TTCGCCGAGT TCTTCAGGGT GCCAGCGTGG
AACGTGGAGA AAGGAGGAAT ACTCGTATTG CCCAGTAACG TTTCATTTGA GGAGGGTTCC
TTCGTGGAGC CCCTAGCTAC AGTGGTTAGG GCCCAGAGGC GCGTAGGAAT ATCGAGGGAC
GACTCGGTTC TCATAGTCGG TGCAGGTCCC ATGGGGCTAT TACATCTTCT AAAGATTAAG
GACATGGGAG TGTCAAACGT AATCATTTCT GACGTATCGG AGTACAGGTT GAACTTCGCT
GAATCTCTAG GTGCTTCCCT CTTGCTCAAT CCCACCAAAC ACCAAGTGGA ACAGGAAGCG
AAGAAGGCCA CGGATGGTCG TGGCGTAGAT GTGGCGATAA TAGCCTCAGG GGCTCCTCAA
GCTATCCTTT CAGGTCTGAA CTCTGTGAGG AAGGGAGGTA GGGTGCTACT GTTTGGGGTT
CCCTACAAAG GAACGATACT CAACTACGAT ATTAGCGAGC TCCTTAACAA CGAAATCTCA
GTAATTCCCA GTAATGCAGC TGTAGAGGAG GACACAAGGG AGGCCCTGAA ACTCATCTCT
GAGAGAAGGG TTGATGTAAG GAAGCTTGTG ACACATAGAT ATGACCTAGA GCAGTTCCAC
GAGGCCGTAA GGGTAGCCAA ACAAGGAAAC GCCATAAAGG TAGTAATAAC TAGTTAA
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| Protein sequence | MKAIIMEGGK AVLKEVPIPK LGQGDVLVEM KACGLCGTDI EKMCGQYTAS QPILGHEPAG
VVAESMSDAV KPGDRVFAHH HVPCYECYYC KKGSPTMCPY YRKTNLDPGG FAEFFRVPAW
NVEKGGILVL PSNVSFEEGS FVEPLATVVR AQRRVGISRD DSVLIVGAGP MGLLHLLKIK
DMGVSNVIIS DVSEYRLNFA ESLGASLLLN PTKHQVEQEA KKATDGRGVD VAIIASGAPQ
AILSGLNSVR KGGRVLLFGV PYKGTILNYD ISELLNNEIS VIPSNAAVEE DTREALKLIS
ERRVDVRKLV THRYDLEQFH EAVRVAKQGN AIKVVITS
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