| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0185 |
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| Symbol | |
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| ID | 5103929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 149378 |
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| End bp | 150253 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506090 |
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| Product | ribokinase |
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| Protein accession | YP_001190286 |
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| Protein GI | 146302970 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000069064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0609987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATAACCG TAGTGGGAAG TTATAACCTT GATATGACGT TCAAGCTCAA TCACTTTCCT
ATACCTGGAG AGACAGTATT TGCTCAGGAA GTCAGAGTAG GTCATGGGGG AAAGGGCTCC
AATCAAGCAG TCTCAGCTTC TAGATTGGGA GCAAGAGCGA GGTTCGTAGG CGCAGTCGGA
AATGACGCGA ATGGTAAAAA TGCGATAAAC TTTCTCAGCT CTGAGGGCGT GGATACCTCA
TGTGTAAGGG TGAAGAATGC CCATACCGGA TCGGCTTACA TCTTACTCAA TGGTGGTGGA
GAGACTATGA TAGTGGTGAA CCGAGGGGCA AACTACGAAT TAACCCCAGA GGACCTAGAC
GGGTGTCTAG AGGGGAAAGT ATTGCTCACT CAGCTCGAGA TCAGGGAAGA TGTGGTGAAG
AGGGCACTGT CAGGGTTTTC CGGTATCAGG ATTTTGAACC CCGCTCCCGC AGAGTTAAAT
GATGTTGAAA TACTCAATTA TGTGGATATA TTAACCCCCA ATGAGGTTGA GTTCCAGGAG
ATCAGTAATT CAGATGATAT GTCGTATGGA GCACAGATAT TGCTAAAGAG GGTCAAACGT
GCTGTGATAG TGACTCTTGG AGAAAACGGT GCAATAATCT ATACCAAGAG CAAGTCGGTG
AGGATACCCA CAATCAAGGT AAACCCCGTG GATACCACTG GCGCAGGCGA CGTCTTTAAT
GCAGCTTTGG CGGTTTTCCT TGAAAGGGAT TACGACCTGG AGACCGCGGT TGAAAAGGCA
AACATTATAG CCTCGTACTC AGTTACCACT TATGGAGCGC TTGGACCAAC GTGGAAAGAG
ATCAAGGAAA AGTACCCGGA AATCCCACTC CCATGA
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| Protein sequence | MITVVGSYNL DMTFKLNHFP IPGETVFAQE VRVGHGGKGS NQAVSASRLG ARARFVGAVG
NDANGKNAIN FLSSEGVDTS CVRVKNAHTG SAYILLNGGG ETMIVVNRGA NYELTPEDLD
GCLEGKVLLT QLEIREDVVK RALSGFSGIR ILNPAPAELN DVEILNYVDI LTPNEVEFQE
ISNSDDMSYG AQILLKRVKR AVIVTLGENG AIIYTKSKSV RIPTIKVNPV DTTGAGDVFN
AALAVFLERD YDLETAVEKA NIIASYSVTT YGALGPTWKE IKEKYPEIPL P
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