| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0184 |
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| Symbol | |
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| ID | 5103928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 148170 |
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| End bp | 149381 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640506089 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001190285 |
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| Protein GI | 146302969 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000409945 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.070974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAAA GACCCATTGC GATGACAATA GCAGGAAGTG ACTCAGGAGG AGGGGCTGGA
GTTCAGGCAG ACCTCAAGAC CTTTACATCT CTTGGCGTGT TCGGCGTATC TGTCATAACT
GGTTTGACTG CCCAGAATAC AGCTAGAGTC ACCAAGGTCC TGGAAGTCCC CCCAGAGTTT
GTGGAGTCCC AATTCGATAC TATAATGGAG GACTTTCAGG TTAAGTATGC CAAGACAGGA
ATGCTTGCAT CGAGCAGGAT AGTTGACGCT GTGGAGAGAA AGCTGACACA ATATGGAATT
AACCTAGTCC TAGACCCAGT TATGATATCA AAGAGTGGTT ACCCTCTAGT AACCGAGGAA
GTGGTAAGGG ATATAGTGAG GCTAGCTAGA AAATCCCTGA TAATAACCCC CAACAAATAT
GAGGCGGAAA GACTAACTGG ATTTAGGATA AGAACTCGAG ATGATCTAAG AAATACAGCA
TTGCACCTCT ATAAGAGCTT GGGTGTAAAC GTTGTGGTAA AGGGAGGGAA AGCCATTGGA
GGATATGATT TCGCAGTCGT TGATGGCGAT GAGATTGAGC TACGTGGAGA ATTAATAAAT
ACCGATAATC TTCACGGGAG TGGTGATGTA TTTTCCGCCT CAATTACGGC CTTTCTGAGC
AAGGGTCTTA ATCTACGCGA CGCGTTAAGG GAGGCTAAGA AAGTTGTAAG TGAGGCAATC
AAATTCTCTC TTGCAATTGG TCACGGGAAC GGGCCAGTGG ATCCTTTCTC CTCTGTGGAG
AGGGTGGTTA AGATTAACCA AGCCAGGGAG GATCTCGAGA GACTTGTGGA ATTTCTTGAA
AGGAACAAGG AAATCGTTAA GAAAATGATA ACTCATGAGG AAAAAATGAA CATTGGTGTC
CTAACAGAGT ATGGGGATTT CGCAACTTTA GCCGGGGGGA TCATAAGGTA CATTGACTGG
ATTAAGGTAG ATGGTCCCAT TGTGGTGAAC TGGTACTACA ATATAGTACA CAAGGCCTTG
AAACAAACTG GCAAGAGGCT TGGTATTTTG GTGTCCTTGA CAAACGAGAT ATTAAATGCT
TGTGAGGGCG GTAAACTGAA AATTTCTGAA AGTGGAATTT ACGGCGATCT GGTAATGATA
GATGGGAGGG CAGTCTTGGT GGGAAACAGT TTAAGTGAGA TTATGGAGAA ACTGGAGGTC
CTGAGGAATT GA
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| Protein sequence | MMQRPIAMTI AGSDSGGGAG VQADLKTFTS LGVFGVSVIT GLTAQNTARV TKVLEVPPEF
VESQFDTIME DFQVKYAKTG MLASSRIVDA VERKLTQYGI NLVLDPVMIS KSGYPLVTEE
VVRDIVRLAR KSLIITPNKY EAERLTGFRI RTRDDLRNTA LHLYKSLGVN VVVKGGKAIG
GYDFAVVDGD EIELRGELIN TDNLHGSGDV FSASITAFLS KGLNLRDALR EAKKVVSEAI
KFSLAIGHGN GPVDPFSSVE RVVKINQARE DLERLVEFLE RNKEIVKKMI THEEKMNIGV
LTEYGDFATL AGGIIRYIDW IKVDGPIVVN WYYNIVHKAL KQTGKRLGIL VSLTNEILNA
CEGGKLKISE SGIYGDLVMI DGRAVLVGNS LSEIMEKLEV LRN
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