| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0171 |
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| Symbol | |
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| ID | 5104960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 138539 |
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| End bp | 139306 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640506074 |
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| Product | undecaprenyl pyrophosphate synthetase |
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| Protein accession | YP_001190272 |
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| Protein GI | 146302956 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0438666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.232038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAAG CATTGATGAA ACCCCTCTAT CCCATTTACG AGCAGATACT TTGGAGGGAG
ATAAGGAAGG GTCCTATACC CAATCATGTT GGAATCATAC CTGACGGCAA TAGGCGATGG
GCCAGAAGTA ACAACTCCTC TATAAATGAA GCTTATCTCA TGGGCTATAA GAAACTAAGG
AACGTCTTAA TCTGGTTATT GGATCTGGGT GTCAAGAACG TTACGGTGTT TGCGCTTTCC
ACAGAGAATT GCACCAAGAG AACTAGGACC GAACTAGACG TCATTATGGG ATATATAAAG
AGGGGAATCG AGGAGATGGT CACAGAGAAC TTCGTTGATA GGTATAGGAT AAAGGTCAGG
GCTATTGGTA AACTTGAAAT GGTCAGTGAC GATTTACGTG ACACCGTGAA GAAAGTAATG
GAAAGATCAG CCAGCTACTT GGATAGAAAG CTCACCCTTG CCATCTGCTA TGGCGGGAGA
CAGGAGATTC TTGATGCGGT TTCTCGGATG ATAAGGGACA CGAACAAGAA GGATCTATCA
AACCTGACAG AGGAGGAGTT CAGGAAGTAT TTTTATGACG AGGAATTGAG TGATATTGAT
TTAGTCATCA GGACATCAGG GGAGATGAGG ATAAGTAACT TCCTTTTGTG GCACCTTGCC
TATTCAGAAC TCTTTTTCTG TGAAGCCTAC TGGCCAGACT TTAGGAGAAT TGATCTCTGG
AGAGCCATAA GGGCATATCA AAGACGAGTG AGAAGGTTCG GGGCTTAA
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| Protein sequence | MLKALMKPLY PIYEQILWRE IRKGPIPNHV GIIPDGNRRW ARSNNSSINE AYLMGYKKLR
NVLIWLLDLG VKNVTVFALS TENCTKRTRT ELDVIMGYIK RGIEEMVTEN FVDRYRIKVR
AIGKLEMVSD DLRDTVKKVM ERSASYLDRK LTLAICYGGR QEILDAVSRM IRDTNKKDLS
NLTEEEFRKY FYDEELSDID LVIRTSGEMR ISNFLLWHLA YSELFFCEAY WPDFRRIDLW
RAIRAYQRRV RRFGA
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