| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0157 |
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| Symbol | |
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| ID | 5105010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 126507 |
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| End bp | 128312 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640506060 |
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| Product | hypothetical protein |
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| Protein accession | YP_001190258 |
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| Protein GI | 146302942 |
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| COG category | [K] Transcription |
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| COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0273927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATAA AGTTATCAAG AAAACTTTCA ATGAGCTATA TTGATCTAGT GGCCTGGTTA
GCTGAGAATA GGGAGAGGTT GGTCGGTTGT AGAATAGATA ACATTTTTGC TACTAATTTA
CCGCATCTGT ACATCTTCGT TATTCATTGC CACAACGGCG ATTCTCAGCT TGTGATCCAG
CCCGGTAAAA GGGTACACTT TACAAAGTTT AACCATGAGA GACTGCTTGA TTCGAAGGCA
AAGATGCTAC GTGAGTTAAT AAGGGGTGAA CTGATAGAAG ACGTTGATGT AGTTAATGGA
GAAAGAATTT TAAGAATGAA ACTAAAGGAC AAAATTGTAT ATATAGAGCT TCTTCCAAAG
GGTACGTTAA TTGTGACGGA TAACGATAAT AGAATCAAGT TTGCACTGGA ACAAAGGGAG
TTCAAGGACA GAACACTGAA GCCTGGGGAG CTCTACGTTC TACCTCCGTC TCCAACAGAG
CTAAAACCTA ACGAGATAGA AAGCTATCTA AAGAAGGGCG CCCTTTCCAG GGTTCTAGGG
GTTCCACAGG AATTTCTTAA TATTCTCTCA ATAAATGCAA ATAATCTAGA TGAATTGGAG
GAAGCTAAGA AAAAACTGGA AAAAGTTATG CAAGATATAC AACACGGCGT AATTCAGCCT
TGCGTGGATT TGGAGAGAAC GGTGTGGCCA GTTCGCTTTC CGGGATGTAC CGAATTACCC
AGTTATAATG AGGCCTTGGA CAACTATTTC ACCTCGCTGG AAAAGGCGGA GCTTGAGAAA
CTGGTTGATG AGGGGGAAGA GAAGAAGCTT GAGGCCACAA TCTCCAAGCT CAAGGAGACT
TTGACTAAGA TGGAGGAGGA AGCTGAGACT TTGAGGAAGA AAGGTAAGGC AATAATGAAT
AATTATCTAG AGGTTGAGGA AAAGATTAAG GAGGGTGCGA AGGAAATAGA GATTGAAGGG
TTAAAGATAG AGATAGATCC CAAGATTTCA GCTTCTAAAA ACGCATCTCA ATATTTTGAA
AAGGCCAAGG AATTAGATGC AAAGATAAGG AGGACAAGGG AGACAATCGA GGAGTTGGAA
AAGAAAAAAC AGGAAATTAA GGCTAAGTCT AAGGAGACCA TTGAAGGAAG CAAGATTCTG
GTAAGAAAGA AGGAGTGGTA TGAAAGGTAT CATTGGACCA TCACATCTAA TGGTTTCATT
GTGATAGCTG GGAGGGATAT TGACCAGAAT GAGAGTATTG TGAGGAAAAT GCTAGAGGAC
AAGGATATCT TTTTGCATGC AGATATCCAG GGGGCTCCAG CCACTGTGAT TAAGAATCCA
GTTGGTATAG GAGAGCAGGA TCTAATGGAC GCTGCAGTGT TGGCAGGTTG TTACTCTAAA
GCGTGGAAAT TGGGGCTAGC TAGCATAGAT GTGTTTTGGG TTTACGGAGA GCAGGTCTCA
AAGTCGCCAC CCTCAGGCGA ATATCTGCCC AAGGGATCCT TCATGATCTA TGGGAAAAAG
AATTACATCA AGAACGTGAA ACTAGAGTTG ACAATTGGGG TAAACGTGGA AAGCGATTTC
AGGATTGAGG TGGGTTCATT TGAAGCTATT TCCAAAAGAT GTAAGGTATT TGTCACCATA
ACTCCAGGAG ATTCTGATCC AGAAAAACTA GGAGATAGAA TCAGCAGGAT ATTCGCTAGG
GAACTGGGTG TGGATGGGGT TAAGGCTCTG AAGGATGAAA TAGTGAGGAT GATCCCAGGG
AAATCCAAAA TTAAGGGCAC AACACACCAG CTGGCTAACT CAACCGGATT GAATCTTAAG
GATTAA
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| Protein sequence | MSIKLSRKLS MSYIDLVAWL AENRERLVGC RIDNIFATNL PHLYIFVIHC HNGDSQLVIQ
PGKRVHFTKF NHERLLDSKA KMLRELIRGE LIEDVDVVNG ERILRMKLKD KIVYIELLPK
GTLIVTDNDN RIKFALEQRE FKDRTLKPGE LYVLPPSPTE LKPNEIESYL KKGALSRVLG
VPQEFLNILS INANNLDELE EAKKKLEKVM QDIQHGVIQP CVDLERTVWP VRFPGCTELP
SYNEALDNYF TSLEKAELEK LVDEGEEKKL EATISKLKET LTKMEEEAET LRKKGKAIMN
NYLEVEEKIK EGAKEIEIEG LKIEIDPKIS ASKNASQYFE KAKELDAKIR RTRETIEELE
KKKQEIKAKS KETIEGSKIL VRKKEWYERY HWTITSNGFI VIAGRDIDQN ESIVRKMLED
KDIFLHADIQ GAPATVIKNP VGIGEQDLMD AAVLAGCYSK AWKLGLASID VFWVYGEQVS
KSPPSGEYLP KGSFMIYGKK NYIKNVKLEL TIGVNVESDF RIEVGSFEAI SKRCKVFVTI
TPGDSDPEKL GDRISRIFAR ELGVDGVKAL KDEIVRMIPG KSKIKGTTHQ LANSTGLNLK
D
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