| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0154 |
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| Symbol | |
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| ID | 5105007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 125133 |
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| End bp | 125798 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640506057 |
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| Product | AMMECR1 domain-containing protein |
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| Protein accession | YP_001190255 |
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| Protein GI | 146302939 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2078] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00296] uncharacterized protein, PH0010 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.502826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0201385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCTAC TAAGCATAGA GGACATAGAC CTGCAAGTAG GGAAGAATCT GGTGAAAATA
GCTAGATCCT CGATTGAGAG AAGATTGAGA GGTAAGGGTG AAAGTCCCAA GTTTGAAGAC
CCGGTTCTAG ATAAATACGG GATGGCATTT GTTACACTCG AGTCTGATCT AGGGGGAAAA
TATGAACTTA GGGGTTGCAT TGGTTACATA GAGGCTGTGG CTCCCATCAA GGAGATCGTC
TCTAAAGCAG CGCTAGCAGC GGCATTTTCT GATCCTAGAT TCCCACCAGT TAGGCCCGAA
GAACTAGATC AACTGGTAAT AGAAGTGACC ATACTGACCA AACCTGAAAA TATCGAGGTC
GATGATAGGA GAAAATTACC TTCCATGATA GAGGTGGGTA AGGATGGCCT AATTGTCGAG
AAAGGTATCA TGTACTCAGG TTTACTCCTT CCGCAGGTTC CTGTGGAATA CTGCTGGGAC
GCTGAAACAT TTCTCGCGGA GACCTGCATA AAGGCTGGAC TTCTACCAGA TTGTTGGCTG
GAGAACTCAG TTAAAATTAA AAAATTTCAA GGTATTATTA TTAGAGAGGA ATCACCAAAC
GGAAATGTTA CAATAATGAA GCCATCAGAC ATTAAATGTA AACTACCCTT AACTCTCAAT
GAGTAA
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| Protein sequence | MNLLSIEDID LQVGKNLVKI ARSSIERRLR GKGESPKFED PVLDKYGMAF VTLESDLGGK
YELRGCIGYI EAVAPIKEIV SKAALAAAFS DPRFPPVRPE ELDQLVIEVT ILTKPENIEV
DDRRKLPSMI EVGKDGLIVE KGIMYSGLLL PQVPVEYCWD AETFLAETCI KAGLLPDCWL
ENSVKIKKFQ GIIIREESPN GNVTIMKPSD IKCKLPLTLN E
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