| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0149 |
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| Symbol | |
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| ID | 5105002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 120179 |
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| End bp | 121162 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640506052 |
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| Product | RNA procession exonuclease-like protein |
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| Protein accession | YP_001190250 |
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| Protein GI | 146302934 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0104249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTCA GGATAGAGAG GAACGGCGCA ATACTAATTG GCGAGAACTT TACAGTTGAC
GGTCATTGGA AAAGGAACTT CAGGATAGTT ACACATTTCC ACTCAGATCA CACATTACAG
CTTTCCAGCA GTGTCAAGGA GTGCTTAGGG GTCATAGCTA CTCCACCCAC TATGCAGGTT
CTTGAGGTCC TCGGATATAA GATAGCCCGA AATAAGAGAC TAGATTTGAA TTACGGGGTT
ACGATCAACG TGGATGAAGA GAGACTAACT CTTCACCCCT CCGATCACGT GTTTGGATCG
GCGCAAGTAG AAATTATCAC CAACGAGGAA ACCATAGCCT ATACAGGGGA TTTCAAAAAT
CCGGAAAAGG GGACCCCCAT ACTTAACCCT GACATACTAA TTATAGAGTC CACTTACGGC
AAACCGGAAT TTACGAGAAA GTTTAAGGGA GAGGTTGAAC AGCTGATGTC GGATTTCATA
AATGACGCGG TAGTGAAAAT GCCCGTAAGA ATATACGGCT ATCACGGAAA GTTACAGGAG
GTAATGAGGG TGCTTAGGAA GAACGGTGTC ATTGCCCCAT TTATAGTTGA CGGAAAGGTA
CGGGATATAA CGCGGATCGC CATCTCCAAC GGGATACAAA TCGAGGACGT CTTCTCCAAG
GAGGAAGCCG AGGCCCAGGG CATATTGAAG GACCGATGGT ACATAGAGTT TCTCCACTTT
AATCAATTCA AGCAAAGGGA CTCTCTTCAT GCAAACTTTC TACTTTCCGG ATGGGAATTT
GAGGTTCCCG TTAAGAGGAT AGACAAGGTA TCCACCAGTA TAGCATTTAG TGATCATGCA
GATTTTGAGG ATTTAATATA TTACGTGGAC AACTCCAAGG CAAAACTAAT AATTGCGGAG
GGTGGAAGAA GGGGTTACTC AAAAGAACTT TCAAAACATA TAAGAAATAT TCTTAAAAGA
AATTCCATAA GCCTCCCAGA ATAA
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| Protein sequence | MNVRIERNGA ILIGENFTVD GHWKRNFRIV THFHSDHTLQ LSSSVKECLG VIATPPTMQV
LEVLGYKIAR NKRLDLNYGV TINVDEERLT LHPSDHVFGS AQVEIITNEE TIAYTGDFKN
PEKGTPILNP DILIIESTYG KPEFTRKFKG EVEQLMSDFI NDAVVKMPVR IYGYHGKLQE
VMRVLRKNGV IAPFIVDGKV RDITRIAISN GIQIEDVFSK EEAEAQGILK DRWYIEFLHF
NQFKQRDSLH ANFLLSGWEF EVPVKRIDKV STSIAFSDHA DFEDLIYYVD NSKAKLIIAE
GGRRGYSKEL SKHIRNILKR NSISLPE
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