| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0147 |
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| Symbol | |
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| ID | 5105000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 118141 |
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| End bp | 119673 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506050 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_001190248 |
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| Protein GI | 146302932 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACCCT TTAGTAGAGT TTTGGTTGCA AACAGGGGAG AAATTGCAGT AAGGGTAATG
AAGGCAATAA AGGAAATGGG AATGACAGCA ATAGCTGTTT ACTCTGAGGC TGACAAGTAC
GCAGTCCACG TTAAGTATGC CGATGAAGCT TATTATATTG GACCCTCGCC GGCCTTGGAA
AGTTACCTCA ACATACCCCA CATCATTGAC GCAGCGGAGA AGGCTCACGC TGACGCTGTT
CATCCTGGAT ATGGATTCTT GTCGGAGAAT GCTGACTTCG TGGAGGCAGT TGAAAAGGCA
GGAATGACTT ACATAGGTCC CTCTGCTGAG GTCATGAGAA AGATAAAGGA TAAGCTGGAT
GGGAAAAGGA TAGCCCAGTT ATCTGGTGTC CCCATTGCCC CTGGCTCGGA TGGCCCCGTA
GAATCCATTG ACGAGGCTCT TAAGTTGGCT GAGAAGATAG GATACCCCAT CATGGTTAAG
GCCGCTAGCG GGGGTGGTGG AGTAGGTATA ACAAAGATAG ATACACCTGA CCAGCTCATT
GACGCATGGG AAAGAAACAA GAGGTTAGCT ACACAAGCCT TCGGACGATC TGATCTATAC
ATAGAAAAAG CCGCCGTAAA CCCTAGGCAC ATTGAGTTTC AGTTAATTGG CGATAAGTAC
GGCAACTATG TCGTTGCTTG GGAGAGGGAA TGTACTATTC AGAGAAGAAA CCAGAAGTTG
ATAGAGGAGG CACCATCTCC AGCAATCACA ATGGAAGAAA GGTCACGAAT GTTCGAGCCT
ATATACAAAT ATGGGAAGTT AATTAATTAC TTTACCCTGG GTACTTTCGA GACAGTTTTC
TCTGATGCCA CAAGGGAGTT CTACTTCCTT GAGCTGAACA AAAGGCTTCA GGTAGAACAC
CCAGTTACTG AGTTAATATT CAGAATTGAT CTGGTAAAGC TACAGATAAG GCTAGCTGCA
GGAGAACATT TGCCATTCAC GCAGGAGGAA CTCAACAAGA GGGCGAGAGG TGCAGCAATA
GAGTTCAGGA TAAATGCCGA GGATCCAATA AATAATTTCA GCGGAAGCTC AGGTTTCATT
ACGTACTACA GGGAGCCCAC GGGTCCTGGA GTGAGAATGG ATAGCGGTGT AACGGAGGGA
AGCTGGGTAC CTCCTTTCTA CGACTCTCTA GTATCGAAGT TGATTGTGTA TGGAGAAGAC
AGGCAATACG CAATACAAAC TGCCATGAGG GCACTAGACG ATTACAAGAT TGGCGGAGTC
AAAACGACTA TACCGCTATA CAAGCTCATC ATGAGGGATC CCGACTTTCA GGAAGGAAGG
TTCAGTACTG CCTATATTTC CCAGAAGATT GACTCAATGG TTAAGAAACT GAAGGCCGAA
GAGGAGATGA TGGCTTCAGT GGCCGCAGTT CTTCAGAGCA GGGGACTCCT TAGAAAGAAG
GCTTCAGCTC CTCAGGAGCA GGCGAAACCA GGCTCAGGAT GGAAGAGTTA CGGTATCATG
ATGCAGAGCA CTCCTAGGGT GATGTGGGGA TGA
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| Protein sequence | MPPFSRVLVA NRGEIAVRVM KAIKEMGMTA IAVYSEADKY AVHVKYADEA YYIGPSPALE
SYLNIPHIID AAEKAHADAV HPGYGFLSEN ADFVEAVEKA GMTYIGPSAE VMRKIKDKLD
GKRIAQLSGV PIAPGSDGPV ESIDEALKLA EKIGYPIMVK AASGGGGVGI TKIDTPDQLI
DAWERNKRLA TQAFGRSDLY IEKAAVNPRH IEFQLIGDKY GNYVVAWERE CTIQRRNQKL
IEEAPSPAIT MEERSRMFEP IYKYGKLINY FTLGTFETVF SDATREFYFL ELNKRLQVEH
PVTELIFRID LVKLQIRLAA GEHLPFTQEE LNKRARGAAI EFRINAEDPI NNFSGSSGFI
TYYREPTGPG VRMDSGVTEG SWVPPFYDSL VSKLIVYGED RQYAIQTAMR ALDDYKIGGV
KTTIPLYKLI MRDPDFQEGR FSTAYISQKI DSMVKKLKAE EEMMASVAAV LQSRGLLRKK
ASAPQEQAKP GSGWKSYGIM MQSTPRVMWG
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