| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0137 |
|---|
| Symbol | |
|---|
| ID | 5104990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 112174 |
|---|
| End bp | 112467 |
|---|
| Gene Length | 294 bp |
|---|
| Protein Length | 97 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640506038 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001190238 |
|---|
| Protein GI | 146302922 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00282501 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATA TAGTAAGGCT TAACGAAATC GATCAAGATG TCTTGTTAGC TTTATTAAAT
AAGGATAAGC TGGGGATAAG GGAGTTAGAG GAGGAAATAA AAAAAGTTTC GAAACAGAGG
TCTCCTAATG CTATAACTAA GAGCGTAGAT AAGCTCCTTA AGATGGGGTT AGTAAAGGAG
GAGAAGGAGG AAAAACCGCC CAGAGGTAAG AGACTAATTT ACCTAACTGA TAAGGGTAAG
GAGGTGGCAC AACACTTAAA ATCGATTTAT GAACTTATCG GGAAGAGTGG GTAA
|
|---|
| Protein sequence | MEDIVRLNEI DQDVLLALLN KDKLGIRELE EEIKKVSKQR SPNAITKSVD KLLKMGLVKE
EKEEKPPRGK RLIYLTDKGK EVAQHLKSIY ELIGKSG
|
|---|
| |