| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0135 |
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| Symbol | |
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| ID | 5104988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 110475 |
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| End bp | 111779 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640506036 |
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| Product | nuclease |
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| Protein accession | YP_001190236 |
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| Protein GI | 146302920 |
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| COG category | [K] Transcription |
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| COG ID | [COG1475] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00112116 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAAGT TCATTACAAT AACTAAGGTC AGTATTGATA AACTCAAAGA AGTACAAGAA
TATAAGGAGT TAATACCAGA GAACAACAGC TATGAGGAGT TAAAGAACTC AATACAACAA
TTAGGCTTCC TAGACCCAAT AACTGTCAAT ACAAATTATG AGATTTTAGA CGGTTATACG
AGGTATAGGA TTGCAAAGGA GTTAGGAATT AAGGAAATTC CCGTTGAGGT TTATCAGACT
TCTGGAAGGG AAGAAGAGCT GGACATTATT GCAAGCTTTA ATCTAAAAAG GAGGCATTTA
ACAAAAAGCG AAATAATATT ACTTATTGAT AAAATATTAG AAAAGAAGAA GGAGTTAATG
AAAAAAGTAG AGGAATTGGA AAAATCTAGT ACAAATGATA AAAATCTGGG GATGCATCCC
CAACCTTCTG CTAGAGAAGA GGCTGATGAG ATACGAAAAG AATTAGAAGC GAAATTACCG
CCAGATAATG TAATTGATAA CGATACCATC AGACGTTATG TTCAAATAAA GAAGGAAGCT
CCATGGCTGA CCAACTATAT CGGTGATCCC AAAAACGGTA AGATTGGTAT AAGGACTGCT
TATGATATCT ATCTAGCATT AAAAAGGAAG AACTTACTGG ACCTGGACAG AAGAATTCCA
AAGAGTGAGC TGAAATTATT ACTCACTACC AGAGAAGGTC GCAAAATCAT CTCAGAAAGA
GACGATCTAC TACAGCTGAT TTTAGACCAT AAGATGGCTG TTTCTCAAGC AATAAACAAA
CTGAAGACCG AAGAGAAGTT AGCTAAGTCT AAGAAGTCCA GGGCAAAAGA GGAAGAGGAC
TTAGACGAAA CTGAAGAAGA GGAGGGAGAG GAGGATGAAA GTAAAGGCAG ACAGAGAGAG
TTAGATGAAA ATGATAACGA AGAATATGAC TTTGTGGGTG AATGGCAAAA AGCTAAGGAA
GAGGAGGAAA AACAAGAGGC TAAACAACAG TTAACTCCCC AGTTAAACGG GCAACTCTTA
GTAAAACAAG AGGTAACTGA AAGTAAAACC CAGAACGATT TCCTAAACGA CTTAAAGACT
AAGGGGTTTG CAGAACTACC CTTTGAAATA GCACTAATTA AGATTGAAGG GAAATGTTAT
GCAATAAACG TAGGAGCTCT GCGTGATTTA GAACAGGGAC TTCCAGAGAA GTGGAAGGGT
CTTGAAGCCT TCCTAAATAA GTACAGCATT ATAATCCCGG ATGAGGTTGA AGGACTCTAC
GTTATCCCGT GGAAACTGTT AGGAAGGTGT AACGAATGGA AATAA
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| Protein sequence | MAKFITITKV SIDKLKEVQE YKELIPENNS YEELKNSIQQ LGFLDPITVN TNYEILDGYT
RYRIAKELGI KEIPVEVYQT SGREEELDII ASFNLKRRHL TKSEIILLID KILEKKKELM
KKVEELEKSS TNDKNLGMHP QPSAREEADE IRKELEAKLP PDNVIDNDTI RRYVQIKKEA
PWLTNYIGDP KNGKIGIRTA YDIYLALKRK NLLDLDRRIP KSELKLLLTT REGRKIISER
DDLLQLILDH KMAVSQAINK LKTEEKLAKS KKSRAKEEED LDETEEEEGE EDESKGRQRE
LDENDNEEYD FVGEWQKAKE EEEKQEAKQQ LTPQLNGQLL VKQEVTESKT QNDFLNDLKT
KGFAELPFEI ALIKIEGKCY AINVGALRDL EQGLPEKWKG LEAFLNKYSI IIPDEVEGLY
VIPWKLLGRC NEWK
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