| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0129 |
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| Symbol | |
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| ID | 5104982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 105029 |
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| End bp | 106222 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640506030 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_001190230 |
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| Protein GI | 146302914 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.730138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000955625 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAGAAA AATACGCTGA AATAATAGGA GAAAACGAGC TAGATGCAAT CTACAGAATA
GCTGAGAAGT TGAAGGGATT GTCAGTTCTT CATGTTAATT CAACACCTAA GGGCGGTGGA
GTAGCTGAAA TCTTGAGCAA ACTTGTCCCT ATGATGAACG AACTGGGGAT AAACACTCAA
TGGAAGGTCA TAAGGGGGGA CAATGAGTTC TTTAACGTAA CAAAGTCATT TCATAACTCC
CTACAGAACG GTTCGGGAAA TGTAAATGAT GAGACTTTCG CAGTTTACGA GAAATGGCAA
GATATTAATG CATCGGAAAT TCCGCTGGAC TACGATGTGG TCTTCATACA CGATCCTCAG
CCTGCAGGAT TAATCAAGGT AAGAAAGAAG GGAAAGTGGA TATGGAGATG TCATATTGAT
ATTTCCAATC CATATCCAAA GGTTTGGGAA TTCCTTCGTA AGTATGTTCA GCAGTATGAC
GCCATGATAA TATCGTCATC GGTATTTGGA AGAGAGGACC TTACCATCCC ACAGTACGTG
ATTCCGCCGT CGATAGATCC CCTAAGCGTT AAGAACAGAG AGATATCACG ATTTACTGTC
GAGAGGATCC TAAGGAAGTT TGAGGTTGAT CCTGATAGGC CACTGGTGAC TCAGATTAGC
AGATTTGACC GGGCAAAGGA TCCAATAGGA GTAATATCTG CCTTTAAGGG GCTAAAGAAG
CACATAGATG CTCAATTGGT CTACTTGGGA AGCCCCGCAT CTGACGACCC CGAAGGGGAT
CAGGTATATC AGGAGACGGT AAAGGCAGCT GAAGGAGTGA AAGATGTTCA TCTCTTAATG
CTACCCCCCG ACAGTGATCT GGAGGTTAAT GCGTTCCAAA GGGGAGCAGA CGTCGTAATG
CAGAAATCGA TTAAGGAAGG CTTCGGTTTA ACCGTAAGCG AGGCCATGTG GAAAAGGAGA
GCAGTAATTG GTGGTAATAC GGGAGGAATT CCCTTACAGA TAATCCATGG TTATACGGGA
TTCCTAGTGA ATACGCCCGA GGAGGCCACA CATTATCTCA TTTACTTACT GCGAAATAGA
CAAATAAGGG AGAAGATAGG TCAGGACGCT AGGGAGCATG TTAGAAATAA CTTCCTGATG
ACTAGGGAAC TTCGGGATTA CCTAATGGTA ATGTTATTGT CAATTCAAGG CTGA
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| Protein sequence | MIEKYAEIIG ENELDAIYRI AEKLKGLSVL HVNSTPKGGG VAEILSKLVP MMNELGINTQ
WKVIRGDNEF FNVTKSFHNS LQNGSGNVND ETFAVYEKWQ DINASEIPLD YDVVFIHDPQ
PAGLIKVRKK GKWIWRCHID ISNPYPKVWE FLRKYVQQYD AMIISSSVFG REDLTIPQYV
IPPSIDPLSV KNREISRFTV ERILRKFEVD PDRPLVTQIS RFDRAKDPIG VISAFKGLKK
HIDAQLVYLG SPASDDPEGD QVYQETVKAA EGVKDVHLLM LPPDSDLEVN AFQRGADVVM
QKSIKEGFGL TVSEAMWKRR AVIGGNTGGI PLQIIHGYTG FLVNTPEEAT HYLIYLLRNR
QIREKIGQDA REHVRNNFLM TRELRDYLMV MLLSIQG
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