Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0118 |
Symbol | |
ID | 5104971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 97413 |
End bp | 97955 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640506017 |
Product | cytidylate kinase |
Protein accession | YP_001190219 |
Protein GI | 146302903 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1102] Cytidylate kinase |
TIGRFAM ID | [TIGR02173] cytidylate kinase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000087822 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000442728 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATACTTG TGGTTAGTGG GCCTTCGGGT AGCGGGAAAA CGACTGTAGC TAAGTCTCTC TCAGTTAAGT ATGGACTTAG GTTTGTTTCA GGAGGTCAAA TCTTTAGGGA AAAGGCATCC TCGATGGGGA TGGATCTGCT TTCATTGAAT AAGGAGGCTG AGAAAGACTT TGACATAGAC AAGGTTATTG ATAAAGAGAT ATTGAACCAA GCTAAAATGT CCAATGTTGT AATAGAATCG CACATAGCTG GCTGGATATT AGCGGGAGAA TCTACAGTAA GTATTTATCT TTGGGCGCCG TTGGACGAAA GAGCTAGGAG GATATCTAAG AGAGATGGAA TCTCTTATGA GAATGCACTA TTAAGTATTC TAGAGAGAGA ACAAAGCCAT TATTACAGGT TCTGGAAATA TTATGGTATA GACATTCAAG ATCTTTCCCT TTACGATCTA GTGATTAACA CCTCTAAGCT TTCTCCCGAA AAGGTGTTGG GCCTTATAGA ATACTTTTTA GATTCATACA TTCAGTTAAG TCCCCGTAAA TGA
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Protein sequence | MILVVSGPSG SGKTTVAKSL SVKYGLRFVS GGQIFREKAS SMGMDLLSLN KEAEKDFDID KVIDKEILNQ AKMSNVVIES HIAGWILAGE STVSIYLWAP LDERARRISK RDGISYENAL LSILEREQSH YYRFWKYYGI DIQDLSLYDL VINTSKLSPE KVLGLIEYFL DSYIQLSPRK
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