Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0107 |
Symbol | rpl6p |
ID | 5103915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 91170 |
End bp | 91715 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640506006 |
Product | 50S ribosomal protein L6P |
Protein accession | YP_001190208 |
Protein GI | 146302892 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03653] archaeal ribosomal protein L6P |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000249213 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000420842 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCAGATGG TATCCTTCAG AGAGGAAATA CAAATACCTT CTGGGATAAC AGTTAACATT GATGGTAAGA CGGTGAAGGT AAAGGGGAAG AAGGGTGAAC TATCAAGAGA CTTCTCCTTT GCCAAATTCC TTACCATTTC CCTTGAGGAT GGCAAAATAA TACTAGAGGG ATCCTTCCTG GGGAGAAGGG AGAAGGCCAC AGCATATAGT ATTGTAAAGC ATATCAAGAA CATGTTCACC GGGGTTCAAA ATGGATACAG ATATTATCTG AAGATAATAT TTACTCATTT CCCAATAACT GTAAAGGTTG TTAACGATGA GGTTCAGATC ACTAACCTAA TTGGAGAGAA GAATGTTAGA GTGGCCAAGA TAATGCCAGG CGTTAAGGTG ACGGTTAAAG GAGAGGATAT AGTGGTTGAA GGGATTGATC TAGAAAAGGT GTCGCAGACC GCTGCTAATA TTGAGACAGT AACTAAAATC AGAGATTTCG ATAGGAGGAT ATTCTCAGAT GGGATTTATA TTTACAAGAA AGAGGTGATC TCGTAA
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Protein sequence | MQMVSFREEI QIPSGITVNI DGKTVKVKGK KGELSRDFSF AKFLTISLED GKIILEGSFL GRREKATAYS IVKHIKNMFT GVQNGYRYYL KIIFTHFPIT VKVVNDEVQI TNLIGEKNVR VAKIMPGVKV TVKGEDIVVE GIDLEKVSQT AANIETVTKI RDFDRRIFSD GIYIYKKEVI S
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