Gene Msed_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0101 
Symbolrpl14p 
ID5103909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp88569 
End bp88985 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content46% 
IMG OID640506000 
Product50S ribosomal protein L14P 
Protein accessionYP_001190202 
Protein GI146302886 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0093] Ribosomal protein L14 
TIGRFAM ID[TIGR03673] 50S ribosomal protein L14P 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000731136 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000456679 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCAGAAA AAATGCAGGT ATTAGGATCG AGGAAGGGCC TAACTCCCGC AGTTCAAAAC 
TATACTATGG TAAATGTGTC TGACAACAGT GGCGCTAAGG AGGCCATGAT CATTAGTGTC
TTCGGCTATA GAGGTGCTCT AAGGAGAGTA CCTTACGCAA ACGTAGGCGA TCTTGTGATG
GTATCTGTTA GGAAAGGAGC TCCTGACGTC AGAAAGCAGA AGTTTAAGGC GGTGGTAATA
AGGCAGAGAA TGCCCTTCAG AAGGCCAGAT GGTACTTGGA TCTCGTTCGA TGATAATGCA
GTAGTTATTG TAAACCCAGA TGGTACAGCA AAGGGAACAG AGATAAGAGG TCCAGTAGCA
AGGGAAGCTG CAGAAAGATG GCCAAAGGTA GCTAGCCTGG CTACCTTAAT AGTTTAG
 
Protein sequence
MPEKMQVLGS RKGLTPAVQN YTMVNVSDNS GAKEAMIISV FGYRGALRRV PYANVGDLVM 
VSVRKGAPDV RKQKFKAVVI RQRMPFRRPD GTWISFDDNA VVIVNPDGTA KGTEIRGPVA
REAAERWPKV ASLATLIV