| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0097 |
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| Symbol | rps3p |
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| ID | 5103905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 87072 |
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| End bp | 87794 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640505996 |
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| Product | 30S ribosomal protein S3P |
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| Protein accession | YP_001190198 |
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| Protein GI | 146302882 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01008] ribosomal protein S3, eukaryotic/archaeal type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000179661 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000500549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | TTGGTTGATA TAAAGAAATA CTTCCTTCAA AAGTCCATGA CAAGAGTAAT GGTAGATGAG
TTCTTAGCAA AGGAATATTA TAACGCTGAA TATGCTGGTT CTGAGATCAG CAAGACTCCC
ATGGGTACTA GAGTTACAAT CTATGCGGGT AGACCAGCGA TCATTATAGG TAAAGATGGA
AAGACAATAA AGAGGTTGGC CCAAATATTG GAGAAGTACT TTAACCTAGA GAATCCTCAG
ATCACTGTAA CTCAGCCGGA GAAACCAGAG CTGAACGCTA GGGTAATGGC GTTCAGGCTA
GCGGTGACCC TTGAGAAGGG ATATCACTTC CGAAGAGCTG CCTTCATGAC AATCAGGAGG
ATAATGAACG CTGGAGCCCT TGGAGCAGAG GTGATAGTTA GCGGAAAGAT TACTTCAGAG
AGAGCTAAGT TCGAGAAGCT TAAGGAGGGA ATAGTCTACA AGACCGGCAA TAACCTAGAT
GTAATGGTGG ACAGGGCCAT AGCCATAGCC ACACTCAAGA TGGGAATATA TGGCGTTGAG
GTGGTTATAA CGAAGCCCCT GAGGACCATA GATAAAATTT CGCTTAAACA AACTGCAGGC
ACTAGTACTG GGGGCGAATC TGGAGAAGTT AGGGTAACAA ACGTGAGGAT AATTGATGAG
ACCCAAAACG TTAAACTTGA GGAACAATTA GGAGGCGCAG AAAATGACCA AAAGAGTCAG
TGA
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| Protein sequence | MVDIKKYFLQ KSMTRVMVDE FLAKEYYNAE YAGSEISKTP MGTRVTIYAG RPAIIIGKDG
KTIKRLAQIL EKYFNLENPQ ITVTQPEKPE LNARVMAFRL AVTLEKGYHF RRAAFMTIRR
IMNAGALGAE VIVSGKITSE RAKFEKLKEG IVYKTGNNLD VMVDRAIAIA TLKMGIYGVE
VVITKPLRTI DKISLKQTAG TSTGGESGEV RVTNVRIIDE TQNVKLEEQL GGAENDQKSQ
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