| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0091 |
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| Symbol | rpl3p |
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| ID | 5103899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 83347 |
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| End bp | 84372 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640505990 |
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| Product | 50S ribosomal protein L3P |
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| Protein accession | YP_001190192 |
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| Protein GI | 146302876 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03626] archaeal ribosomal protein L3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000432349 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000658147 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGACATA GAAAGTTATC CTCGCCAAGG AGAGGATCAG CCGGATTAAG ACCCAGAAAA
AGATCAGAGG AGCTTTTACC ATCTCCAAGA TCTTATCCTG AAGTGAACTT ACCCAATCCC
GTAACTCTTG GGTTTGTGGG ATATAAGGTG GGCATGACCC ACATCTTTAT GATAGACGAA
GATAGATCCT CGTCTATGTT TGGGAAGGAG ATTTATGTCC CCGTTACTGT TCTGGAGACT
CCACCCATTT ACGTTCTTGC GTTAAGAGCT TATGGGTTAA ACAATAGGGG AGAACATTCA
GTAATGGGCG AAGTGTGGGG GGATCTGGGA GACTTTGGCA AGTTCATCAC TAGAAGAATA
AGGGGATTAA AGATTGATAA AGAGAAGAAG GAACATCAGT TAAAGGACAT TGAGTCTAAC
CTTGAGAGCG TTAGCTACTT TAGGCTTCTC GTTTCAACCC AACCGCATCT TATTCCAGCC
CTTGGTAAGA AAACTCCGGA TATTGTAGAG GTTCAGATAG GTGGTGGAAA CACAAAAAAC
CAACTCGAGT ATGGTTTAAA GCTTCTCGGC AATACTCTTT CAGTAAGGGA CGTCTTCAAA
GAAGGTCAGC TTATGGATAT AATAGGTGTG ACCAAGGGAC ATGGTTTTCA AGGTGTGATC
AAGAGGTACG GAGTACAGGA GTTACCTAGA TGGCATAAAC ATAGGAAAGG TAGCAGGAAG
GTTGGTACAA AAGGTCCATC TTTGGGAACT CCAAGTTATG TTCCTCAGCC AGGCCAGATG
GGATTCCACA GGAGAACCGA GTACAACAAG AGGATCCTGA AGATATCAGA CGATACCAAG
TTGATAAACC CCAAGGGTGG TTTCGTGAGA TATGGACTAG TCAAGAATAC CTACCTTCTA
GTTCAAGGCT CCACGATAGG ATCCATAAAG AGACCTCTCT TCCTGAGGTA CCCCATCAGA
CCTTATTCCG CACAACTTCC GGTTCCGAAG GTTACCTATG TGGATGTGAA CAGTAAGCAG
GGGTGA
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| Protein sequence | MGHRKLSSPR RGSAGLRPRK RSEELLPSPR SYPEVNLPNP VTLGFVGYKV GMTHIFMIDE
DRSSSMFGKE IYVPVTVLET PPIYVLALRA YGLNNRGEHS VMGEVWGDLG DFGKFITRRI
RGLKIDKEKK EHQLKDIESN LESVSYFRLL VSTQPHLIPA LGKKTPDIVE VQIGGGNTKN
QLEYGLKLLG NTLSVRDVFK EGQLMDIIGV TKGHGFQGVI KRYGVQELPR WHKHRKGSRK
VGTKGPSLGT PSYVPQPGQM GFHRRTEYNK RILKISDDTK LINPKGGFVR YGLVKNTYLL
VQGSTIGSIK RPLFLRYPIR PYSAQLPVPK VTYVDVNSKQ G
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