| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0072 |
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| Symbol | |
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| ID | 5104650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 66442 |
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| End bp | 66981 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640505971 |
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| Product | hypothetical protein |
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| Protein accession | YP_001190173 |
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| Protein GI | 146302857 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1603] RNase P/RNase MRP subunit p30 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000875737 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0105675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAAACTT GTATACAAGA TCCTAAACTA ATTGAGATAT CTAGTCGGCT GGGATTTCAG
GGATACATTG TTGAGTCAAG AAAACTGGAT GAGGCGAGGT GGCAAGGAGT TAAGAAGAGA
TTGACCTTGG TGGGCGACTC ACAGGTGAGC CCTAACACAC CTATCGTGTT TTCCAAGCCC
TTATCTAGGG CTCAATTGGT CAAAGTCCTG AATGACATCA AGATTCATGG GATAAGTTTA
GACAACGATA ATTTCTATTT ACTGAAAAAG AATCTCTTAA ATTTGGCAAA GAGTAAAGGA
AAATACATTG AAATAAGGTT GAACAGCTCA TCATCTAGTG TTATCCGCAG GGCTATAGAA
TGGGGATATA AGGGCGCAAA AGTGATATTT TCGTCCTGCG CCTCTAGAAA ATCGGAGTTA
TGGGCTCCCT TAAGCTTGGT AAACTACCTG GCATTTCATG GGGCGGACAT GAAGGATGTA
ATAACGTGGG TCTATACATA TCCCTTGGAG TTGTTTAAAC TTGTATCAGA CAATTCTTGA
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| Protein sequence | METCIQDPKL IEISSRLGFQ GYIVESRKLD EARWQGVKKR LTLVGDSQVS PNTPIVFSKP
LSRAQLVKVL NDIKIHGISL DNDNFYLLKK NLLNLAKSKG KYIEIRLNSS SSSVIRRAIE
WGYKGAKVIF SSCASRKSEL WAPLSLVNYL AFHGADMKDV ITWVYTYPLE LFKLVSDNS
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