| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0061 |
|---|
| Symbol | |
|---|
| ID | 5104253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 58947 |
|---|
| End bp | 59246 |
|---|
| Gene Length | 300 bp |
|---|
| Protein Length | 99 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640505960 |
|---|
| Product | 50S ribosomal protein L21e |
|---|
| Protein accession | YP_001190162 |
|---|
| Protein GI | 146302846 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2139] Ribosomal protein L21E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.257868 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.16503 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAAGC ATTCGAGAGG AAACAGGACA AGGAGCAGGA AACTTCTCAA GAAGTCACCT
AGGGAAAGGG GAGCGGTTCC TTCTTTGGGT AGGCTAATGC TTGACCTGAA GGAAGGTGAA
AGGGTAGTTA TAAAGATAAA CTCCTCCACC CATAGTGGGA TGCCACACAG GAGATATCAG
GGTAAGGTTG GAACCATTCT CGGGAAAAGG GGCAAGTCCT ACGAAGTTAA GGTAAAGCTG
GGAGATAAGG AAAAGATCCT CATAGTTAGG CCAGAACACC TGAATCAGAT AAAGGCTTAA
|
|---|
| Protein sequence | MVKHSRGNRT RSRKLLKKSP RERGAVPSLG RLMLDLKEGE RVVIKINSST HSGMPHRRYQ
GKVGTILGKR GKSYEVKVKL GDKEKILIVR PEHLNQIKA
|
|---|
| |