| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0060 |
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| Symbol | |
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| ID | 5104252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 57034 |
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| End bp | 58632 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640505958 |
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| Product | hypothetical protein |
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| Protein accession | YP_001190161 |
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| Protein GI | 146302845 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.214565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCC TTCAAAGAGA ACAGTTAGTT CAGGCCGAGA TAAACGGGGA TTCTCAGGCC
GTTTTGACCC AAATGAGGGT GATCAATGAG CAACTCAATA ACTTTGTTCA GAACGATAGG
GTACTGGAAT CGATCTCCTT TAACGCAATA GCCATGGTGC GGGTTGGGTC ACCTTTCACG
TATATCACCA ACAACGATGA GGCCAACGAG GAGGCCAGAT GTAACGGCAG AACCGAGGAT
AACATGAGGG ATAGATTCAA CGCGGGGGAC AGGGAGTACA TGAAGCTCGC CTTCGTTTCC
ATAGCCAGCG ACGATGACAT ATCTGCGCAA ATCGTGGGCA AGCCCGTCAA GGAAGCTCCC
AAGCTCGTGT TCAGACAGGG CGTTATGGTA AAGCTCACGA ATCCCTCAGG AAAGGAAATT
ATGGTATACG TGGGTGGAAT CTCGCCAGAG TGGAGAGGGG ATAGAGTCTC AACTTATCAG
TACGGTGCAG AGAGGAGATT TAAGTTCAGT TCCGGGGTTA GGAATAGGAT CTCGGGCGTG
TTGGGCAGGT TCAACATTGG CGTGCTCTTT GGCGCAGAGA GGGCATCTCA GGTATTTGTG
AATCCTCCCT CACCCAAGTC GTCAAGCTAC TCCGCGTTCT TGCAGTCATA TAGGAGAGAT
ATACTGGAGG ATAGCATCAA AAAAGGCCCT GGCCTATTTT ACAAAACTCC AACTTCGCAC
GGAGGGTGTA ATGCATGTAC CTCTATAGCG TTATCTACTA GCTCTAACTT TCCAGATCTT
CTCCCGGCTT TCTCCACTCC CTTTGTCCCA TTCATTGACC AGAGCTATTA CTTGATCCCT
GGCTATCCTG AGAACCCCAT AGACGAGTAT TACCTTGGGT CTCCCGTCTA TGCTGGTAAC
TCCAACTGCG ACACACCCAC CATCGTAGGT TTCATCTCCT CCCTTGTACC CTTTTCCCAG
GCCCTTCAGG CTTACGCCCA ACTCCAGAAC AGGTCAGTCC AGTCTAGTAA TCAGCTAGAA
AGTCAGCTGA ACCAGTTCCT CTCATCCTCC TCGGTCGCAT TCGTCTTCCC CCCACCAAGG
AGCTGGAGCT ACGACGACGT AATACAGTGG TCCTACTCCT TGGGCTACTC GCAGGACTAC
ATATCCACGG CCGTCAATTT CGCGGTGGTG TTGGGAATTA TCCTTTCCCA GTACCCTGAG
GACGTCGTCG ACGACCTCGA GAAAGAGCTG TATAGGCACG AGTTCAGTTG TTCCAACCAG
GACCAATGTT ACTCTGAGAT GAGCAAGATA ACGCAGGATA TCTACAACGT GCTCTCCCAG
CAGGGTTCGG ACAAGGAACT TGAGGCATTA CGTGTATGTC ACGCGGAGGC CACCACGCTC
GACGAGACCT GTTACTGGAA CTGTGTGGAT AGGGTCTACG AGTCCCTCAA GCGTCTCCCG
CTCTTTGAAA GGCTACACAT ATCACCTTCG CCCGAGGAGT TAAGGTGGGA TGCGCAAACC
CAATGCAAGG AGGCCTGCAT CAAGTTTAAC GAGAAGAGGT ACCTCGAATG TCTGAAACAG
ATATATCCCT CCAGGGGCAC TCACGTGACG CCCCAGTGA
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| Protein sequence | METLQREQLV QAEINGDSQA VLTQMRVINE QLNNFVQNDR VLESISFNAI AMVRVGSPFT
YITNNDEANE EARCNGRTED NMRDRFNAGD REYMKLAFVS IASDDDISAQ IVGKPVKEAP
KLVFRQGVMV KLTNPSGKEI MVYVGGISPE WRGDRVSTYQ YGAERRFKFS SGVRNRISGV
LGRFNIGVLF GAERASQVFV NPPSPKSSSY SAFLQSYRRD ILEDSIKKGP GLFYKTPTSH
GGCNACTSIA LSTSSNFPDL LPAFSTPFVP FIDQSYYLIP GYPENPIDEY YLGSPVYAGN
SNCDTPTIVG FISSLVPFSQ ALQAYAQLQN RSVQSSNQLE SQLNQFLSSS SVAFVFPPPR
SWSYDDVIQW SYSLGYSQDY ISTAVNFAVV LGIILSQYPE DVVDDLEKEL YRHEFSCSNQ
DQCYSEMSKI TQDIYNVLSQ QGSDKELEAL RVCHAEATTL DETCYWNCVD RVYESLKRLP
LFERLHISPS PEELRWDAQT QCKEACIKFN EKRYLECLKQ IYPSRGTHVT PQ
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