Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0056 |
Symbol | |
ID | 5104634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 51863 |
End bp | 52117 |
Gene Length | 255 bp |
Protein Length | 84 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640505951 |
Product | DKCLD domain-containing protein |
Protein accession | YP_001190157 |
Protein GI | 146302841 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.477818 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTTT CTCCCTTCGT GGAAAGGATA GACAAGTTTT GTGGTTATAA TCAACCCTGG GAAGTTCGGA AGGATTACGT TCCGGCTGGG GATTTCGGAG TCCAGCCTGA TAAGAGAACT ATCAAGGACC TCATAAATAC CTCTATTATT AACGTGGATA AGCCCCCTGG GCCAACTAGT CATGAAGTGG CCTTCTGGGT AAAGACCATG TTTAACCTAC CCAGGGTGGG ACACGGAGGG ACCCTAGAGC CCTAA
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Protein sequence | MDFSPFVERI DKFCGYNQPW EVRKDYVPAG DFGVQPDKRT IKDLINTSII NVDKPPGPTS HEVAFWVKTM FNLPRVGHGG TLEP
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