| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0053 |
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| Symbol | |
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| ID | 5104631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 47130 |
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| End bp | 48773 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640505948 |
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| Product | hypothetical protein |
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| Protein accession | YP_001190154 |
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| Protein GI | 146302838 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0433] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.594463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAG TAACGCGGTA TCTCATAGCA ATAGGCTTAG TGCTTGCGGA GATGATCTTC
GTTGAGCTGG AAAGCCTCCA ACCTATCATT GGCGGGTTTA ACGGTGCCCT AATATTATCC
GTTCTATTAT TTCTGGATGG GGTCTTTTCC CTCCTAGTTT TGGATTCCCT GATCCCGAGC
CTTCTCTTCT CCCTCAGCAT ATTTGCCTTA TTTAATCTAG TTTATGGGTC CGTCGATCCC
CTCATTCTTT TGGAATATCT CTCCGGGGTT GGGATATCAT CGGCATTCCT TTACTTAACG
AGGTCGCTGT GGGATACTAC CTTTAGGCTA TGGAGAAGGA TCAAGAGGAC ACCTGACCTG
AAGATCCTCC TAGTCTCGGC AATACTAGCA CCGGCTGTCT ATGCACTCAC GAGATCGCCA
TTTATGGCCA CTGGAGTGAT AATAGACGGG GCTATTCTCT CCTTTATCGG AAGGATCGAG
TTGAGCCCTT TGTCCTCCCT ATCCTGGATC TCTCTTCCCT ACCTTCTCAT GGTAGAACCC
AAGGAAACTA GTACTGGGAT ATGTATAGGC AATGAAGAGA AGGTGTTGGT TAGAAGTCTT
ACACCTGGGT TGTTTCAAGC AGGATACAGA TATAAATGGA TTAATGTGAA GAAGCCCTTT
TGTGTGGATT TTTCTAAGAT GAAGAATTAC AACATGGTAA TAGTGGGGTC GAGCGGATAT
GGGAAGTCCA CCCTGGCTAA ATTAATCCTT TCAAAAACTA ACGTAGATTA CATCGTCTTC
GACCTACACG GGGAATATGA AGATGTCCCA GGGAGGAGGA TGGATATGTC CCTTAACGGG
GTAAATCCTC TCTCTCTTTT CGGGAGGTCC CCTAAACAGA GATCCATTGA AATTGCCCTG
ATGCTTAAAT CTATCTTCAA TCTGGGAAGT ATTCAGACCA TGGACCTATC GAACCTGTTC
GTTGAGGCGT ACCAGGAAAG GGGAATATAT GACGAGGATG AGAGGACTTG GTCTCTAGAC
CCTCCTACGA TAAGGGATGT GCTTCTACTC CTAGAAAGGA AAAAGAGGGC ATCATTCAAT
TCACAGGATT TGAATAGGTG GGGAAGCATA GATCCTTACC TGAGGTTCCT AGACTCAAAC
ATCTTTTATG GGAGCGAGGA CCTGGGAAAA CTACTTGAAG GAAAAGTTAT ACTAGACTTC
TCTAGGATAA CCACCACGAA CATAAAGTAC ATCCTCATGG AGACCGTTCT AACCTCTATT
CTGGGGAGTA TGTACCTTGA GAAATCTGCC TCACTAAGAA AGCTCGTAGT GATAGACGAG
GCACCCTTTC TACTGGGAAG GGAGAGTGGT GAGGCCCTAG CCGAAAGACT TTTCGCTGAG
GGAAGAAAAT TTGGATATGG CTTTATACTA ATTTCACAAT ATTCCGATAA ACTTGAAAAG
ATGATAAACA ATGCCTCAAT GACCATGATA ATGGGAATGA ATGATCCCGA CGAATTAAAT
TACATCGCTA GGTTGATTGG AGGAGAGAGT CAAGAGGCGA GGAGAGTTAT TTACGAAACT
CTTTCGGTAC TTGAAAGGGG AAAGGTGATA ACAAGAGATA TAACGGCGAA TGATATAGTA
GTTGTTCGCC TAAATCAGGG GTGA
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| Protein sequence | MQKVTRYLIA IGLVLAEMIF VELESLQPII GGFNGALILS VLLFLDGVFS LLVLDSLIPS
LLFSLSIFAL FNLVYGSVDP LILLEYLSGV GISSAFLYLT RSLWDTTFRL WRRIKRTPDL
KILLVSAILA PAVYALTRSP FMATGVIIDG AILSFIGRIE LSPLSSLSWI SLPYLLMVEP
KETSTGICIG NEEKVLVRSL TPGLFQAGYR YKWINVKKPF CVDFSKMKNY NMVIVGSSGY
GKSTLAKLIL SKTNVDYIVF DLHGEYEDVP GRRMDMSLNG VNPLSLFGRS PKQRSIEIAL
MLKSIFNLGS IQTMDLSNLF VEAYQERGIY DEDERTWSLD PPTIRDVLLL LERKKRASFN
SQDLNRWGSI DPYLRFLDSN IFYGSEDLGK LLEGKVILDF SRITTTNIKY ILMETVLTSI
LGSMYLEKSA SLRKLVVIDE APFLLGRESG EALAERLFAE GRKFGYGFIL ISQYSDKLEK
MINNASMTMI MGMNDPDELN YIARLIGGES QEARRVIYET LSVLERGKVI TRDITANDIV
VVRLNQG
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