Gene Msed_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0052 
Symbol 
ID5104630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp46825 
End bp47133 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content42% 
IMG OID640505947 
Producthypothetical protein 
Protein accessionYP_001190153 
Protein GI146302837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.805655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.444536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTTCCA CGTCAGAGGA TTACGATGAC GAAAATGAAC CGGAAACATC GGTGGATGAA 
GCTGGCAAAG TGGAGGAAGA CGAAGAAGGA GTACCAGCTA TGTCCCTTCA GGATATAGAG
TTACTTACAA AGAACACCGA GGTGTGGCAC AGACTTATGT CAGGGAAAAT CAGTATAGAG
GAGGCAAAGA AAGAGTTTGA GGACAATAAC TCGATTTTCG TGAGTAAGAC CGAGAAAGGT
AAAAAGAGGA CAGCCAAGAA AAGGACGACT AAGAAAACTA AAAAAACCAA GAAGAGTAAG
GAAGAGTAA
 
Protein sequence
MISTSEDYDD ENEPETSVDE AGKVEEDEEG VPAMSLQDIE LLTKNTEVWH RLMSGKISIE 
EAKKEFEDNN SIFVSKTEKG KKRTAKKRTT KKTKKTKKSK EE