Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0040 |
Symbol | |
ID | 5105179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 37794 |
End bp | 38378 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640505934 |
Product | 30S ribosomal protein S7P |
Protein accession | YP_001190141 |
Protein GI | 146302825 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0049] Ribosomal protein S7 |
TIGRFAM ID | [TIGR01028] ribosomal protein S7(archaeal)/S5(eukaryotic) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000291032 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0943991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGTT ACGAGCTATC AAAACTGGAT ATAAGGATAT TCGGCAAATG GGATACCAAA GTAGATATAC GAGACCCTAG TTTGAAGAAG TATATCTCAC TCATGCCAGT ATATCTACCT CACTCGGGAG GAAGGCATGA GCATAGGAGG TTTGGAAAAG CTAGGGTCTC CATCGTGGAG AGGTTGATAA ATGAGCTGAT GAGGCCGGGA AAGAATAAGG GAAAGAAGAT CCTGGCATAT AACATTGTGA AGGCTACCTT TGAGCTGATT AATGCTAGAA CAGGTCAAAA TCCTCTGCAG GTATTAGTTA GGGCTATTGA GAACTCAGCG CCTAGGGAAG AGGTGACAAG GATCATGTAC GGTGGAATAG TTTATTACGT CGCTGTTGAC GTCTCTCCCC AAAGAAGAGT GGATATAGTT CTAAGGAACC TAGTAGATGG TGCTAGACAG GCTGCGTTTA ACAATCCGAA GCCCATAGAG GAGGCATTGG CTGATGAGCT AATCGCTGCT GCCAACGGTG ATAACAGAAG CTTCGCCATA AGGAAGAAAG AAGAGATGGA AAGGATAGCC CTGAGCTCCA GATAA
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Protein sequence | MDSYELSKLD IRIFGKWDTK VDIRDPSLKK YISLMPVYLP HSGGRHEHRR FGKARVSIVE RLINELMRPG KNKGKKILAY NIVKATFELI NARTGQNPLQ VLVRAIENSA PREEVTRIMY GGIVYYVAVD VSPQRRVDIV LRNLVDGARQ AAFNNPKPIE EALADELIAA ANGDNRSFAI RKKEEMERIA LSSR
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