| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0032 |
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| Symbol | rpoH |
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| ID | 5105171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 28542 |
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| End bp | 28793 |
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| Gene Length | 252 bp |
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| Protein Length | 83 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640505926 |
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| Product | DNA-directed RNA polymerase subunit H |
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| Protein accession | YP_001190133 |
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| Protein GI | 146302817 |
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| COG category | [K] Transcription |
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| COG ID | [COG2012] DNA-directed RNA polymerase, subunit H, RpoH/RPB5 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.256888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.101872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTTCAT CTTCTAAAAA GATAGATCCG AGTGTGCATG TGCTTGTTCC TAAACATGAA
GTACTCTCTG TTGAGGAAGC GTTCAAGGTC CTTAAGGAGC TTGGTATTGG GCCTGAGCAA
CTTCCTTGGA TGAGAGCCTC AGATCCTATG GCGAGGACAA TCAATGCAAA GCCGGGAGAT
ATAGTGAAAA TAACCAGGAA AAGTCCCATA GTTGGAGAAC TTGTAGTTTA TAGGTATGTG
GTGAGTGGAT AA
|
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| Protein sequence | MRSSSKKIDP SVHVLVPKHE VLSVEEAFKV LKELGIGPEQ LPWMRASDPM ARTINAKPGD
IVKITRKSPI VGELVVYRYV VSG
|
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