Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0028 |
Symbol | |
ID | 5105167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 24724 |
End bp | 24909 |
Gene Length | 186 bp |
Protein Length | 61 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640505922 |
Product | 50S ribosomal protein L24E |
Protein accession | YP_001190129 |
Protein GI | 146302813 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2075] Ribosomal protein L24E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00870941 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTAGTTT CCCACAAGTG CAGTTTCTGT GGAGGAGATA TACCGCCAGC CACTGGCATG ATGCATGTGA GAAATGACGG TACGATTCTT TGGTTCTGCT CAAACAAATG CAGGAAATAT ATGCTAAAGT ATCATAAGGA TGCTAAAAAA CTGAAGTGGA CAACCTCCTA CTCGAGGGTA AGATAA
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Protein sequence | MVVSHKCSFC GGDIPPATGM MHVRNDGTIL WFCSNKCRKY MLKYHKDAKK LKWTTSYSRV R
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