Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0022 |
Symbol | |
ID | 5105161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 20640 |
End bp | 21164 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640505916 |
Product | hypothetical protein |
Protein accession | YP_001190123 |
Protein GI | 146302807 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00364109 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAGTATTG CCAGGATAGC TAAGGGAGTT TACATGGTAG CTGGTAAGAC GTATGGGTAT CTAGCAAACT CTTATTTAAT TGAAAGTGAA GATACGTTCT ACCTAGTTGA CACGGGTGGG AATGAACAGC CAACTGAATT ACTAAGAAAT GTCCTGGAGA TAGCCAAGGA AAAAACTAAA TCCATGAATG TGATTTTGAC TAGTTGCTTA AGGGACGCTG CTGCTGGTGC AAAATTTCTA GTTGACATGA TAAACGCTAG AATAATTATT CACGAGAGGG ATTCGACAGG GCTAAGGATG GGAAGTTGCG CTAAAGAAGA ATATCCAGCC ACTTCACCTT TTATGGTAAT AAGGGAAAAG AAGACTCGCT TAGGAAACCT TGAAATAATT AGATCCAGTT CGCCTACACA AGGTTCGATT ATTTTGAGGA ACAACGATAG CCTCTTCGTT GGGGCTTCAA GGTTGACCCC ATTCGACCCC AAGATTAAAT ATATTTTCGG CTTATATGAA TACAAGAGGT ACTAA
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Protein sequence | MSIARIAKGV YMVAGKTYGY LANSYLIESE DTFYLVDTGG NEQPTELLRN VLEIAKEKTK SMNVILTSCL RDAAAGAKFL VDMINARIII HERDSTGLRM GSCAKEEYPA TSPFMVIREK KTRLGNLEII RSSSPTQGSI ILRNNDSLFV GASRLTPFDP KIKYIFGLYE YKRY
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