Gene Msed_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0022 
Symbol 
ID5105161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp20640 
End bp21164 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content40% 
IMG OID640505916 
Producthypothetical protein 
Protein accessionYP_001190123 
Protein GI146302807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00364109 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGTATTG CCAGGATAGC TAAGGGAGTT TACATGGTAG CTGGTAAGAC GTATGGGTAT 
CTAGCAAACT CTTATTTAAT TGAAAGTGAA GATACGTTCT ACCTAGTTGA CACGGGTGGG
AATGAACAGC CAACTGAATT ACTAAGAAAT GTCCTGGAGA TAGCCAAGGA AAAAACTAAA
TCCATGAATG TGATTTTGAC TAGTTGCTTA AGGGACGCTG CTGCTGGTGC AAAATTTCTA
GTTGACATGA TAAACGCTAG AATAATTATT CACGAGAGGG ATTCGACAGG GCTAAGGATG
GGAAGTTGCG CTAAAGAAGA ATATCCAGCC ACTTCACCTT TTATGGTAAT AAGGGAAAAG
AAGACTCGCT TAGGAAACCT TGAAATAATT AGATCCAGTT CGCCTACACA AGGTTCGATT
ATTTTGAGGA ACAACGATAG CCTCTTCGTT GGGGCTTCAA GGTTGACCCC ATTCGACCCC
AAGATTAAAT ATATTTTCGG CTTATATGAA TACAAGAGGT ACTAA
 
Protein sequence
MSIARIAKGV YMVAGKTYGY LANSYLIESE DTFYLVDTGG NEQPTELLRN VLEIAKEKTK 
SMNVILTSCL RDAAAGAKFL VDMINARIII HERDSTGLRM GSCAKEEYPA TSPFMVIREK
KTRLGNLEII RSSSPTQGSI ILRNNDSLFV GASRLTPFDP KIKYIFGLYE YKRY