| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0021 |
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| Symbol | |
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| ID | 5105160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 19852 |
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| End bp | 20472 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640505915 |
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| Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_001190122 |
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| Protein GI | 146302806 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00371896 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGACCTT ACATAATTAT CTCTAGCACG ATGACAATTG ATGGTAAGAT TGCAGCTAAG
GATTCGTTCA GCGAACTCAG CTGTAGGTAT GACAAGATCA GGCAACATAT GTTAAGAGCG
CAAGTAGATG CTGTGATGAT AGGAGCCAGA ACTGCTAGGG TGGATAATCC ACGCCTGACT
CTAAAATACT ACACGGGGAA AAATCCTATC AGGGTTATCG TAACTAACAG CGGGGATTTG
GATCCTGGAT TGAAAATATT CAATATTCCC CCATCCACAG TAGTTTACAC CAGGAATCTT
AGCGATTCCC TAAAAGAGCT GACAAAAAAG GGTGTATACG TTAGAACGTT TTCGACTCTA
TGTGATGCAA TGGCTGATCT TTATAAAACG TTTTCAGTGA GAACGGTAAT GGTTGAGGGT
GGAGGGAAAC TGAATTGGTC ACTCATGAAA GAAGGATGCG TAGATGAGGT CAGGGTAACT
GTTTCTCCAA GAGTATTTGG TTCCGGCACC TCTATCTTTG ATGGAGATGG TTTTCCAGGA
TCCATGTCAC CTACTCTTAA GCTACATTCA GCATATAGAT GCCAGTGTGG AGAAGAAATA
GTCTTAATCT ACAAGAAGTA G
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| Protein sequence | MRPYIIISST MTIDGKIAAK DSFSELSCRY DKIRQHMLRA QVDAVMIGAR TARVDNPRLT
LKYYTGKNPI RVIVTNSGDL DPGLKIFNIP PSTVVYTRNL SDSLKELTKK GVYVRTFSTL
CDAMADLYKT FSVRTVMVEG GGKLNWSLMK EGCVDEVRVT VSPRVFGSGT SIFDGDGFPG
SMSPTLKLHS AYRCQCGEEI VLIYKK
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