| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0020 |
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| Symbol | |
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| ID | 5105159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 18084 |
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| End bp | 19829 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640505914 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001190121 |
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| Protein GI | 146302805 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1964] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00170872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCTCAAG TTGAGACAGA AAATAAGGGT TTTAGACTGC TACCAGCGCC ATCAAAATTC
GAAAATGGGG AAGTAAAGTT TGGCGACAGG GACATCAAGA TTGGGGGACC TTTACCTAAG
CTTGCCCAGG ACGAGAAGCT TATCAGGGTT ACGCATTCTT TGTGTCCTGC TTGCTACAGG
CTATTACCAG CAACCATATT TGAGAAGGAC GAAAAGATGT ACATTAGGAA GATATGTCCT
GAGCATGGAG AGTTTGAGGA CCTTTATTAT GGAGATGTGG GGATGTACTA TAAGTTCGAT
TACTGGGAGT ATGAGGGTAA GGGTCCTAGA GTTCCTTACG TTGACCTTAA GTCTCCCTGT
CCTTATAACT GTGGACTATG TCCAATGCAT CATCAGCACT CGGCACTTGT GAACCTGGTT
ATAACTAACA GATGTGATTT GTCTTGTTGG TACTGCTTCT TCTATGCCGA GAAGGCTGGC
TACGTCTTTG AGCCAACACT GGAGCAGATA AAGTTCATGG TAGATCAGTT AAAGAGGCAG
GATACTACCA TAGTTATCCA GGTTACAGGA GGCGAACCTA CACTTAGGGA AGATATTGTT
GAGGTAATTA AGCTCCTCAG GGAGTCAGGT GTCAGACATA TTCAGCTCAA CAGTTGGGGG
GGAACTTTCG CCAAGATGTA CATGGCTGAT CCGGATAAGG CAGTGAGATA CGCCATAGCC
CTGAGGGAGG CAGGAGTCAA CACTGTTTAC ATGAGCTTTG ACGGGACTAC CAGAAAGACC
AATCCCAAGA ATCATTGGGA GGTTCCTTAC ACCTTAGAAG TGTTCAGAAG GGCAGGGATG
ACCAGCGTCG TTCTAGTACC CACAGTTATC AAGACTGTAA ATGACCATGA TCTAGGAAAT
ATAGTGAAAT TCGCTGCAAG GAATATGGAC GTTGTGAGAG CCATAAACTT CCAACCTGTC
AGCTTGACAG GAATGATGAA GAGGAATATG AGGGCCAAGT TTAGAATAAC CATTCCAGAA
GTCCTGAAGA ACATAGAGGA CCAGACGGAC GGCGAGGTCA CTAGGGACAG TTGGTATCCA
ATAGGCACTT CAGTCGTGTT CTCGAGATTA GTCGAGGCTT TAACAGGTAA GGAGCAATTC
GAAATGGCCA ATCACCCAAG TTGCGGTGCT GGCACCTATA TCTACATAGA GTGGAGAAAC
GGAGAACCAC ACTTCATACC CATTTCCAAG TTCATTGACC TAGAGGGTCT TCTAGAGTAC
TTCAAGGAGA AAGCAGAGGA ACTCAAGGAA GGAGCTAACA AGTACTGGAT TGGGATGAAG
TTACTCTATA ACGTCAGGAA GTTCATCGAC AAGGAGAAAG GACCCAAGGA CTTCGATGTA
TATAAGATGC TGTATAATGT GGTGGTAAGT CACAACTATG AAGCTCTAGG CGAATGGCAT
TACAGGACAT TGTTCCTGGG AACCATGCAC TTCATGGACC TCTACAATTA CGATATTAAC
AGGGTCATGA GATGCGATAT TCACTATGTT GTACCAGATG GGAGAGTAAT TCCATTCTGT
ACCTACAACG TTCTTAATGA TCTATACAGA GATAAAGTAC TCAGGGAGTA TCAGATACCT
CTAGATGATT GGATAAAGAA GCATGGGGAG AACAGTCTTG GAGATGCAAT GAAGTATAGA
AGGGTTGCAA GTACTCTAGA GAAGGGAGAA ATATACAAGG AGACGTACAA GTACTTTAAC
GAGTGA
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| Protein sequence | MAQVETENKG FRLLPAPSKF ENGEVKFGDR DIKIGGPLPK LAQDEKLIRV THSLCPACYR
LLPATIFEKD EKMYIRKICP EHGEFEDLYY GDVGMYYKFD YWEYEGKGPR VPYVDLKSPC
PYNCGLCPMH HQHSALVNLV ITNRCDLSCW YCFFYAEKAG YVFEPTLEQI KFMVDQLKRQ
DTTIVIQVTG GEPTLREDIV EVIKLLRESG VRHIQLNSWG GTFAKMYMAD PDKAVRYAIA
LREAGVNTVY MSFDGTTRKT NPKNHWEVPY TLEVFRRAGM TSVVLVPTVI KTVNDHDLGN
IVKFAARNMD VVRAINFQPV SLTGMMKRNM RAKFRITIPE VLKNIEDQTD GEVTRDSWYP
IGTSVVFSRL VEALTGKEQF EMANHPSCGA GTYIYIEWRN GEPHFIPISK FIDLEGLLEY
FKEKAEELKE GANKYWIGMK LLYNVRKFID KEKGPKDFDV YKMLYNVVVS HNYEALGEWH
YRTLFLGTMH FMDLYNYDIN RVMRCDIHYV VPDGRVIPFC TYNVLNDLYR DKVLREYQIP
LDDWIKKHGE NSLGDAMKYR RVASTLEKGE IYKETYKYFN E
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