Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0018 |
Symbol | |
ID | 5105157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 15575 |
End bp | 16951 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640505911 |
Product | adenylosuccinate lyase |
Protein accession | YP_001190119 |
Protein GI | 146302803 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.146335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000415583 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGTATGG ATGTGGTTTG TCCCATAGAC TGGAGATATG GTAGCAAGGA AATGAGGAGG ATATTCACTA GAGAGGGAAT CATTGAGTAC AGAATTAAGG TTGAATTAGC GTTACTTTAC GCCCTAAAGG AACTGGGCTA CGTATCTGAG GAGGAATATG GTAAGGTGGA GAAAGCCTCA GAGAGCGTCA CGCCCGAAGA GGTGGATAAC CTAGAGGCCA AACTTGGACA TGATGTGATG GCCCTTGTGG TATCCATGGC AGAAAAGGCT GGGGATGCGG GTAGATTCGT ACATTTTGGT GCAACTAGTT ACGATATAGT GGACACTGCC TATGCCTTGA TGTTCAGAGA TGCGCTATCC ATCCTGAAGG CTAAGTTCGT CAAATCTTTA GATAAATTAA AAGATCTTAG CCTGAAGTAT CAGGACCAGG TTATGGTGGG CAGGACTCAC GCTCAACATG CAGTACCCAT CACCTTGGGA TTCAAATTCG CGAACTACTT GTATGAGATG ACAAGGTCAT TGGAAAGGTT GGTAGAGACC GAGAAGAGGG TAGTCCTGGG TAAAATGAGC GGAGCTGTCG GTACTATGGC GAGTTGGGGA AAGGATGGAC TCAAGGTGGA AGAGTTGGTT ATGAGGAGGC TTAACCTGAG GCCTCACTCC ATATCCACTC AGGTTGCACC TAGGGACGGT TTTGCCGAGT TGATCAGCGA TCTAGCCATA GCTGGATCGG TGATGGACAG GTTCGCGATA GAGGTTAGGG AGCTCATGAG GCCTGAGATC GGGGAGATGG CCGAGGGAGT AGGGGACAGG GTCGGTAGCA GTACCATGCC CCACAAGGAG AACCCGGTAA CTGCGGAGAA GATTAGTGGT CTCTCCAAGT TACTAAGAGG AATGGTCGTA TCTGAACTGG AAAATATTCC ACTCTGGCAT GAGAGAGATT TAACCAATAG CTCAAGTGAG AGATTTATCA TATCCCACGC CTTCCTTGTT ATGGACGAGA TGCTAGACAG CTTTAATGAA TTATTATCTA ACTTGAGAAT TAATTTAGAC GCCATGGAAA GGAATCTTCG GCTAAGTAAA GGATTGAATA TGGCTGAAAG CTTAATGATT AACCTCACAT TGAAGGGTTT ACCTAGGCAT AAGGCCCATG AGATAGTTAG CAAGATCTCC AGAGAGGCCA GAAAAGGAAA TTCCAGTCTC CTGGAGGAGG CCATCAAAGA CAAAACAATC TCGTCGATGT TCAGTCAAGA GGAGCTTGAA AGAATATTGA ATCCCAAGGC CTATCTGGGC CAGTATAAAA CACTTATACA ACGGGCTATA GATTACTATG AGAACCTAGT AAGAGAGCTT AATGAGACCA GGGGAGTAAT ACATTAA
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Protein sequence | MSMDVVCPID WRYGSKEMRR IFTREGIIEY RIKVELALLY ALKELGYVSE EEYGKVEKAS ESVTPEEVDN LEAKLGHDVM ALVVSMAEKA GDAGRFVHFG ATSYDIVDTA YALMFRDALS ILKAKFVKSL DKLKDLSLKY QDQVMVGRTH AQHAVPITLG FKFANYLYEM TRSLERLVET EKRVVLGKMS GAVGTMASWG KDGLKVEELV MRRLNLRPHS ISTQVAPRDG FAELISDLAI AGSVMDRFAI EVRELMRPEI GEMAEGVGDR VGSSTMPHKE NPVTAEKISG LSKLLRGMVV SELENIPLWH ERDLTNSSSE RFIISHAFLV MDEMLDSFNE LLSNLRINLD AMERNLRLSK GLNMAESLMI NLTLKGLPRH KAHEIVSKIS REARKGNSSL LEEAIKDKTI SSMFSQEELE RILNPKAYLG QYKTLIQRAI DYYENLVREL NETRGVIH
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