| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0013 |
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| Symbol | |
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| ID | 5105152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 9918 |
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| End bp | 10883 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640505906 |
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| Product | AsnC family transcriptional regulator |
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| Protein accession | YP_001190114 |
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| Protein GI | 146302798 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000293296 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0126394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTTG CCGATACCCA GATTAAGCTT CTCATGGAAC TTCAATACAA CTTCCCTCTC
GATGAGAAAC CCTTCGATAT AGTAGCTGGC AAGCTGAATC TAAGAACTGA CCTAGTCCTC
AAGGAAACAC TGAATCTTAT AGATTCTGAA ATTATAAAAA GAGTTGGAAT GTATGTCAAT
TTTAGATCTA AGGGAATGGA AGGAGCGTTA ATTGCCGCAT CCATACCCCT AGATCAACTG
GATAAGTTCA GGAGAGAAGC GCTTCACATA AGGGAACTCA CGCATAACTT CATCAGGAAC
CATCCAAGAT ATAACGTCTG GTACGTCCTT AAGGCTGAAT CGAAAGAAGC CTTAGAGAAG
AGGGTCAGGG ATCTGATGGA GGAGGTAAAA GCTGAAGACT ATGTAATACT TTTCTCCAAG
AGGAATCTCA AATTAAGTGT AAAGTACGAT TTAATACGCG GGATCTCATG GAGCAAAAAT
GAGAAAACAC CTGAGAAAAT TCCCACGGCT GATGAACTAG GGCTAAACAT GGAATTCCTG
AAGGCTTTGT CCTATCCCCT TCCCATAGTA GAGAGGCCTT TCAAGGCACT TGCCGAGAGA
TTTGGGTATA GAGAAGCGGA ACTCGTGGAC TTGATTTCTG AATTAAGATC AAAGCACGTT
ATCAAGGATT ACGGAGCCAC AGTAAATGGA GAAAAGGTAG GAATTACTGA GAACGCTATG
TTACTCATCA ATACTGATAA TATCGAAGAA TCCTGTAACA GGATAGCTGA AAATCTGAAC
GAGGCCACGC ACGTGGTGTT AAGGGAAAGC AATAAGCCCT GGGATTACCT GTGCTACTGC
ATGCTGCATG GTAGGAGCAA GGCAGTTATA AGGGAAGCCT CCATGAAGGC CTTGGGGATA
ACCGGAGCTA AAAGCTACAT GCTCCTATAC AGTCTTGACA ATTTAAAGCC CGGAATAGTT
ATGTGA
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| Protein sequence | MDLADTQIKL LMELQYNFPL DEKPFDIVAG KLNLRTDLVL KETLNLIDSE IIKRVGMYVN
FRSKGMEGAL IAASIPLDQL DKFRREALHI RELTHNFIRN HPRYNVWYVL KAESKEALEK
RVRDLMEEVK AEDYVILFSK RNLKLSVKYD LIRGISWSKN EKTPEKIPTA DELGLNMEFL
KALSYPLPIV ERPFKALAER FGYREAELVD LISELRSKHV IKDYGATVNG EKVGITENAM
LLINTDNIEE SCNRIAENLN EATHVVLRES NKPWDYLCYC MLHGRSKAVI REASMKALGI
TGAKSYMLLY SLDNLKPGIV M
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