| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0012 |
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| Symbol | |
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| ID | 5105028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 9305 |
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| End bp | 9925 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640505905 |
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| Product | prephenate dehydratase |
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| Protein accession | YP_001190113 |
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| Protein GI | 146302797 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000330103 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.121609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGATAACC TATACACCAG AAAGGGAGTG TATGTGAACA AAAGGATAGA CATGAAGATA
GACCTAGTCT TAGCCTCAAG GCCTGACGTA GAACTGGAAT CAGTGACTAA AGTTTACTCC
CATAATCACG CAATACATGA GGCCAGAAAC ACCCTATCCA AACTCGGACT TACAAATTTC
ATTCCAGTGA ACAGTACATC TAAGGCGGCT CAACTAGCCC TAGAGGATAA ACAATCTGCG
GCGATATGTT CTAGATTTGC GGCGAAGTTG TACGGGTTAA AAATTCTCAA GGAGAACATC
CAGGATGGGG TTAATATAAC TAGGTTCCTT GTGGTGTCCA GAGAACTGAC GGAGGTTGGC
GAGAGGACCA TAGTGTTTTT CACAGTTCCC GACGTTCCAG GTTCACTATT CAAGGTCCTA
GAGAAATTCT ATTTGCATAA CGTTAATCTG TCAATGATTT ACTCTAGGCC AACCAAGATA
ATTCCATGGA ATTACTATTT TTATCTGGAG TTTGAGGGAA GCATTTCCGA GGCAAAGAGA
ACAGGCCTTC TGGACGAGTT ATCCAAGGTT ACGCAGGAAC TAAAAATAGT AGGAAGCTAC
ACTACAATAC CTGTCACATA A
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| Protein sequence | MDNLYTRKGV YVNKRIDMKI DLVLASRPDV ELESVTKVYS HNHAIHEARN TLSKLGLTNF
IPVNSTSKAA QLALEDKQSA AICSRFAAKL YGLKILKENI QDGVNITRFL VVSRELTEVG
ERTIVFFTVP DVPGSLFKVL EKFYLHNVNL SMIYSRPTKI IPWNYYFYLE FEGSISEAKR
TGLLDELSKV TQELKIVGSY TTIPVT
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