| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0011 |
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| Symbol | |
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| ID | 5105027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 7850 |
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| End bp | 9058 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640505904 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001190112 |
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| Protein GI | 146302796 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.059163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.133507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGAA AAATTCTAGA TGATATATTT AGGGCAAGGG AGAGAATATC TCCCTATATC
CATGAGACGC CCGTGGACTA TTCCACTACT TTTTCGAGAA TGACTCAGTC CGAAGTTTAT
CTAAAACTGG AGAACCTACA GAAGACTGGC TCATTCAAGG TTAGAGGGGC CTTTAATAAG
ATCTTGGAAA TGAAGGAAGA GGAAAGAAAG AGAGGCGTAA TAGCCGTTTC TGCCGGCAAT
CACGCCCAGG GTGTAGCCTA TGCTGCAATG ACATTGGGTA TAAAGTCCAC CATTGTTATG
CCAGAAACTG CCCCTATCTC CAAGTATAAG GCAACAAAAG GTTACGGCGC CGAGGTAATT
CTATACGGGA AGTTCATCCA CGAGAGCATG AAGAAGGCGG AGGAGTTGAT ACGGGAGAGG
AACTTGACCC TTGTTCATCC ATACGATGAT CCGTTGATAA TCGCTGGCCA AGGGACAGCT
GGGCTTGAGA TGGCAAAGGA GAAACCTGAT GTCGTAATAG TACCCATTGG AGGTGGAGGG
TTAATCTCTG GAGTTTCAGT TGCCCTAAAG GGGATTAACC CAAACACTAA GGTGATAGGA
GTTCAATCTT TCGCCTCTCC TTCGTTAAAG ATCTCAAAGG AACTTGGAAG GTTAACTGAT
ATAGAGCCCT CCTATTCTAT TGCGGACGGA ATCCTGGTTA AGTCCCCTTC TTCCCTCACA
TTTGAAATCG TCTCAGAATA TGTAGACGAC ATAGTTCTAG TGGATGATGA CGAGATAGCC
TGGGCTATGA TGATGCTTCT GGAAAGGAGC AAGACGGTAG TAGAGCCTGC AGGAGCTGCT
CCATTGGCAG CGCTACTTAG CGGTAAAGTT GAGGCTAGAG GGAAGAAAGT TATGGCACTC
CTTAGCGGAG GTAATGTAGA TCTGTCCCTT CTGGCGAGGA TAATTGATAA GACATTGTAT
AAGACCAAGA GGATTGTTAA GGCAAGGGTA ATAGTTCCGG ACAAACCTGG CTATCTTAAC
AAGGTTCTTA ATCACGTAGC CCAAATACGA GGAAATATAA TTGACGTGGT TCACGATAGG
GTAAGCAGTG ATGTTTTGCC TGGTTACACA AAAATATATG TCATGTTTGA GGTCGCAGAA
CAAGAGGATC TAGGAAAATT CATAGTAAGC CTTCAAAATG AGAATATAGA GGTTAAACTC
ATAGAATAG
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| Protein sequence | MMRKILDDIF RARERISPYI HETPVDYSTT FSRMTQSEVY LKLENLQKTG SFKVRGAFNK
ILEMKEEERK RGVIAVSAGN HAQGVAYAAM TLGIKSTIVM PETAPISKYK ATKGYGAEVI
LYGKFIHESM KKAEELIRER NLTLVHPYDD PLIIAGQGTA GLEMAKEKPD VVIVPIGGGG
LISGVSVALK GINPNTKVIG VQSFASPSLK ISKELGRLTD IEPSYSIADG ILVKSPSSLT
FEIVSEYVDD IVLVDDDEIA WAMMMLLERS KTVVEPAGAA PLAALLSGKV EARGKKVMAL
LSGGNVDLSL LARIIDKTLY KTKRIVKARV IVPDKPGYLN KVLNHVAQIR GNIIDVVHDR
VSSDVLPGYT KIYVMFEVAE QEDLGKFIVS LQNENIEVKL IE
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