Gene Msed_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0004 
Symbol 
ID5105020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp2970 
End bp3434 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content46% 
IMG OID640505897 
Productnicotinamide-nucleotide adenylyltransferase 
Protein accessionYP_001190105 
Protein GI146302789 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1056] Nicotinamide mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR01527] nicotinamide-nucleotide adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.142407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTAAGT GGGGGTTGGA GAGGTTAGAT GAGCTAATAA TCCTAATTGG GAGCGCCCAA 
GAGAGTCACA CTCTCTCTAA TCCCTTCACG GCTGGGGAGA GAATTGAGAT GATTAGGAGA
GCCATGAAAG CCGAGGGAAT ACCGGGAGAC AGGTACTATC TCATACCAGT ACCGGATATC
CTCATGAACA ACGTGTGGGC ATATCACGTC AAGATGTATG TTCCGTCGTT TGAGGCGGTT
ATAGCTAGGA ACCCACTGGT ACTAAGACTG TTTAAGGAAG CCGGAAGCGA GATCCTCATA
CCCCCCTCAT TCCACAGGGA GAAGTACAAC TCCACCCTAA TCAGGAAGAA TATGATAACA
GGAGAGAAGT GGGAAAGTTT AGTTCCAGGA GAGGTATCAG ATTTCATAAA GAGTATTAAG
GGAGATGAAC GATTAAGAGA AATAGTAGGT ACTGATAAGA GGTGA
 
Protein sequence
MVKWGLERLD ELIILIGSAQ ESHTLSNPFT AGERIEMIRR AMKAEGIPGD RYYLIPVPDI 
LMNNVWAYHV KMYVPSFEAV IARNPLVLRL FKEAGSEILI PPSFHREKYN STLIRKNMIT
GEKWESLVPG EVSDFIKSIK GDERLREIVG TDKR