| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0001 |
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| Symbol | |
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| ID | 5105029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 331 |
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| End bp | 1521 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640505894 |
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| Product | ORC complex protein Cdc6/Orc1 |
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| Protein accession | YP_001190102 |
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| Protein GI | 146302786 |
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| COG category | [L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1474] Cdc6-related protein, AAA superfamily ATPase |
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| TIGRFAM ID | [TIGR02928] orc1/cdc6 family replication initiation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.265686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA TTATCGACGA AGTGTTATCC TCAGTTAAGA ACTCAGCCAT CTTCAAGAAC
AGGGAATATC TCCTCCCCGA CTACATCCCA GAGGAGTTGC CTCACCGTGA AAATGAGATA
AAGAAGCTTG CAAGCATTCT CGTTCAGTTG TACAGGGGGG AGAGACCCAG TAACATCTTC
ATTTACGGTC TCACAGGTAC TGGAAAGACC GCAGTAACCA AGTATGTTCT GAGTAATCTG
CAAAGGAAGC TCAATAACTT CGAGTACGTG TACATAAACG CCAGACAGAC CGACACCCCC
TACCGGATCC TGGCAGATAT AATTGAGATC CTAGGGGATA AGGTTCCCTT CACGGGCCTT
TCCACGGCGG AGCTGTACAG GAGGATGGTC AAGGTTTTGG AGAGGTCAGA AAGGGTTATG
ATTATCGTGC TGGATGAGAT TGATGCACTG GTCAAGAAGC ACGGTGATGA TATACTCTAC
AAGTTAACCA GGGTGAATTA CGACGTTCAT AAGAGTAAGA TCTCCATCGT AGGAATAACC
AATGACGTAA AGTTCATAGA TGGGCTCGAT CCCAGGGTTA GGAGTAGCCT TGGAGAGGAG
GAGTTGGTGT TTCCCCCATA CAACGCTGAA CAACTGGAGG ATATCCTCAA GAAGAGGGCA
GTCCTGGCCT TCAGGGAGGG AGTGGTATCG GAGTCCATCA TCAAGTTATG CGCAGCCATA
GCTGCCAGGG ATCACGGAGA TGCCAGGAGG GCCCTAGATT TGCTTAGGGT TGCCGGGGAG
ATCACGGAAA GGGAGAGGAA AAACCAGGTA GGCGAGGAAG AAGTTGAGAA GGCCAGGGTA
GAGATAGAGA GGGATCGCGT GTATGAGGTA ATCGCGACCT TACCCTTCCA CTCTAAGCTG
GTCCTGTTAT CCATCATTAA GGGTCTAACC AAAAATACCA GGCTTACCAC GGGGGAAATT
TACGACCTTT ACAGGAACAT TGCCACCTCG ATGGGATCCG AATTTGTGAC CCAGAGGAGG
GCAAGTGACA TAATAAACGA ACTGGACATG ATGGGGATAA TCTCAGCTAG GGTGGTGAAC
AGGGGAAGAT ATGGTAAGAC AAAGGAAGTT GTTCTGGCAG TCGACTCCGG AATAGTCCTG
AAAGCCCTCC TGGAGAGTGA CGAAAGGTTT GCTGATTTCT GGAGTGGATG A
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| Protein sequence | MSDIIDEVLS SVKNSAIFKN REYLLPDYIP EELPHRENEI KKLASILVQL YRGERPSNIF
IYGLTGTGKT AVTKYVLSNL QRKLNNFEYV YINARQTDTP YRILADIIEI LGDKVPFTGL
STAELYRRMV KVLERSERVM IIVLDEIDAL VKKHGDDILY KLTRVNYDVH KSKISIVGIT
NDVKFIDGLD PRVRSSLGEE ELVFPPYNAE QLEDILKKRA VLAFREGVVS ESIIKLCAAI
AARDHGDARR ALDLLRVAGE ITERERKNQV GEEEVEKARV EIERDRVYEV IATLPFHSKL
VLLSIIKGLT KNTRLTTGEI YDLYRNIATS MGSEFVTQRR ASDIINELDM MGIISARVVN
RGRYGKTKEV VLAVDSGIVL KALLESDERF ADFWSG
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