| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_R0071 |
|---|
| Symbol | |
|---|
| ID | 5107297 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 4308352 |
|---|
| End bp | 4311256 |
|---|
| Gene Length | 2905 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | 640505186 |
|---|
| Product | 23S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.200178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAAGT GAAGAAGCGC ATACGGTGGA TGCCTTGGCA GTCAGAGGCG ATGAAAGACG
TGGTAGCCTG CGAAAAGCTT TGGGGAGTCG GCAAACAGAC TGTGATCCAG AGATCTCTGA
ATGGGGGAAC CCACCTAGGA TAACCTAGGT ATCTTGTACT GAATCCATAG GTGCAAGAGG
CGAACCAGGG GAACTGAAAC ATCTAAGTAC CCTGAGGAAA AGAAATCAAC CGAGATTCCC
TTAGTAGTGG CGAGCGAACG GGGACTAGCC CTTAAGTTGG TTTGAGTGTA GTGGAAGGCT
CTGGAAAGTG CCGCCGTAGT GGGTGATAGC CCCGTACACG AAACGCTCTT ATCAATGAAA
TCGAGTAGGA CGGGGCACGA GAAACCTTGT CTGAACATGG GGGGACCATC CTCCAAGGCT
AAATACTACT GACTGACCGA TAGTGAACCA GTACCGTGAG GGAAAGGCGA AAAGAACCCC
GGAGAGGGGA GTGAAATAGA ACCTGAAACC GTATGCGTAC AAGCAGTGGG AGCCCACTTT
GTTGGGTGAC TGCGTACCTT TTGTATAATG GGTCAGCGAC TTATATTCAG TGGCGAGCTT
AACCGAATAG GGGAGGCGTA GCGAAAGCGA GTCTTAATAG GGCGCTTTAG TCGCTGGGTA
TAGACCCGAA ACCGGGCGAT CTATCCATGG GCAGGTTGAA GGTTAGGTAA CACTGACTGG
AGGACCGAAC CGACTACCGT TGAAAAGTTA GCGGATGACC TGTGGATCGG AGTGAAAGGC
TAATCAAGCT CGGAGATAGC TGGTTCTCCT CGAAAGCTAT TTAGGTAGCG CCTCGTGTAT
CACTGCTGGG GGTAGAGCAC TGTTTCGGCT AGGGGGTCAT CCCGACTTAC CAAACCGATG
CAAACTCCGA ATACCAGCAA GTGTCAGCAC GGGAGACACA CGGCGGGTGC TAACGTCCGT
CGTGAAAAGG GAAACAACCC AGACCGTCAG CTAAGGTCCC AAAGTTATGG TTAAGTGGGA
AACGATGTGG GAAGGCTTAG ACAGCTAGGA GGTTGGCTTA GAAGCAGCCA TCCTTTAAAG
AAAGCGTAAT AGCTCACTAG TCGAGTCGGC CTGCGCGGAA GATGTAACGG GGCTCAAACC
ATACACCGAA GCTACGGGTT CATCCTTTGG ATGAGCGGTA GAGGAGCGTT CTGTAAGCCT
GTGAAGGTGA GTTGAGAAGC TTGCTGGAGG TATCAGAAGT GCGAATGCTG ACATGAGTAA
CGACAATGGG TGTGAAAAAC ACCCACGCCG AAAGACCAAG GTTTCCTGCG CAACGTTAAT
CGACGCAGGG TTAGTCGGCC CCTAAGGCGA GGCAGAAATG CGTAGTCGAT GGGAAACGGG
TTAATATTCC CGTACTTCTA GTTACTGCGA TGGAGGGACG GAGAAGGCTA GGCCAGCACG
GCGTTGGTTG TCCGTGTTTA AGGTGGTAGG CTGATTTCTT AGGTAAATCC GGGAGATCAA
GGCCGAGAGC TGATGACGAG CGTTCTTTTA GAATGCGAAG TGGTTGATGC CATGCTTCCA
GGAAAAGCTT CTAAGCTTCA GGTAACTAGG AACCGTACCC CAAACCGACA CAGGTGGTTA
GGTAGAGAAT ACCAAGGCGC TTGAGAGAAC TCGGGTGAAG GAACTAGGCA AAATGGCACC
GTAACTTCGG GAGAAGGTGC GCCGGTGAGG GTGAAGTATT TACTACGTAA GCCCATGCCG
GTCGAAGATA CCAGGCCGCT GCGACTGTTT ATTAAAAACA CAGCACTCTG CAAACACGAA
AGTGGACGTA TAGGGTGTGA CGCCTGCCCG GTGCCGGAAG GTTAATTGAT GGGGTTAGCG
CAAGCGAAGC TCTTGATCGA AGCCCCGGTA AACGGCGGCC GTAACTATAA CGGTCCTAAG
GTAGCGAAAT TCCTTGTCGG GTAAGTTCCG ACCTGCACGA ATGGCGTAAC GATGGCGGCG
CTGTCTCCAC CCGAGACTCA GTGAAATTGA AATCGCTGTG AAGATGCAGT GTATCCGCGG
CTAGACGGAA AGACCCCGTG AACCTTTACT ATAGCTTTGC ACTGGACTTT GAGCTTGCTT
GTGTAGGATA GGTGGGAGGC TTTGAAGTGG GGACGCCAGT TCTCATGGAG CCATCCTTGA
AATACCACCC TGGCAACCTT GAGGTTCTAA CTCTGGTCCG TCATCCGGAT CGAGGACAGT
GTATGGTGGG TAGTTTGACT GGGGCGGTCT CCTCCCAAAG AGTAACGGAG GAGTACGAAG
GTGCGCTCAG ACCGGTCGGA AATCGGTCGT AGAGTATAAA GGCAAAAGCG CGCTTGACTG
CGAGACAGAC ACGTCGAGCA GGTACGAAAG TAGGTCTTAG TGATCCGGTG GTTCTGTATG
GAAGGGCCAT CGCTCAACGG ATAAAAGGTA CTCCGGGGAT AACAGGCTGA TACCGCCCAA
GAGTTCATAT CGACGGCGGT GTTTGGCACC TCGATGTCGG CTCATCACAT CCTGGGGCTG
AAGCCGGTCC CAAGGGTATG GCTGTTCGCC ATTTAAAGTG GTACGCGAGC TGGGTTTAGA
ACGTCGTGAG ACAGTTCGGT CCCTATCTGC CGTGGACGTT TGAGATTTGA GAGGGGCTGA
CCTTAGTACG AGAGGACCGG GTTGGACGAA CCTCTGGTGT TCCGGTTGTC ACGCCAGTGG
CACTGCCGGG TAGCTATGTT CGGAAAAGAT AACCGCTGAA AGCATCTAAG CGGGAAACTT
GCCTCAAGAT GAGATCTCAC TGGAGCCTTG AGCTCCCTGA AGGGCCGTCG AAGACTACGA
CGTTGATAGG TGGGGTGTGT AAGCGCTGTG AGGCGTTGAG CTAACCCATA CTAATTGCCC
GTGAGGCTTG ACCATATAAC ACCCA
|
|---|
| Protein sequence | |
|---|
| |