| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_R0011 |
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| Symbol | |
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| ID | 5106948 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1144029 |
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| End bp | 1146931 |
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| Gene Length | 2903 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | 640502233 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0138586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GGTCAAGTGA AGAAGCGCAT ACGGTGGATG CCTTGGCAGT CAGAGGCGAT GAAAGACGTG
GTAGCCTGCG AAAAGCTTTG GGGAGTCGGC AAACAGACTG TGATCCAGAG ATCTCTGAAT
GGGGGAACCC ACCTAGGATA ACCTAGGTAT CTTGTACTGA ATCCATAGGT GCAAGAGGCG
AACCAGGGGA ACTGAAACAT CTAAGTACCC TGAGGAAAAG AAATCAACCG AGATTCCCTT
AGTAGTGGCG AGCGAACGGG GACTAGCCCT TAAGTTGGTT TGAGTGTAGT GGAAGGCTCT
GGAAAGTGCC GCCGTAGTGG GTGATAGCCC CGTACACGAA ACGCTCTTAT CAATGAAATC
GAGTAGGACG GGGCACGAGA AACCTTGTCT GAACATGGGG GGACCATCCT CCAAGGCTAA
ATACTACTGA CTGACCGATA GTGAACCAGT ACCGTGAGGG AAAGGCGAAA AGAACCCCGG
AGAGGGGAGT GAAATAGAAC CTGAAACCGT ATGCGTACAA GCAGTGGGAG CCCACTTTGT
TGGGTGACTG CGTACCTTTT GTATAATGGG TCAGCGACTT ATATTCAGTG GCGAGCTTAA
CCGAATAGGG GAGGCGTAGC GAAAGCGAGT CTTAATAGGG CGCTTTAGTC GCTGGGTATA
GACCCGAAAC CGGGCGATCT ATCCATGGGC AGGTTGAAGG TTAGGTAACA CTGACTGGAG
GACCGAACCG ACTACCGTTG AAAAGTTAGC GGATGACCTG TGGATCGGAG TGAAAGGCTA
ATCAAGCTCG GAGATAGCTG GTTCTCCTCG AAAGCTATTT AGGTAGCGCC TCGTGTATCA
CTGCTGGGGG TAGAGCACTG TTTCGGCTAG GGGGTCATCC CGACTTACCA AACCGATGCA
AACTCCGAAT ACCAGCAAGT GTCAGCACGG GAGACACACG GCGGGTGCTA ACGTCCGTCG
TGAAAAGGGA AACAACCCAG ACCGTCAGCT AAGGTCCCAA AGTTATGGTT AAGTGGGAAA
CGATGTGGGA AGGCTTAGAC AGCTAGGAGG TTGGCTTAGA AGCAGCCATC CTTTAAAGAA
AGCGTAATAG CTCACTAGTC GAGTCGGCCT GCGCGGAAGA TGTAACGGGG CTCAAACCAT
ACACCGAAGC TACGGGTTCA TCCTTTGGAT GAGCGGTAGA GGAGCGTTCT GTAAGCCTGT
GAAGGTGAGT TGAGAAGCTT GCTGGAGGTA TCAGAAGTGC GAATGCTGAC ATGAGTAACG
ACAATGGGTG TGAAAAACAC CCACGCCGAA AGACCAAGGT TTCCTGCGCA ACGTTAATCG
ACGCAGGGTT AGTCGGCCCC TAAGGCGAGG CAGAAATGCG TAGTCGATGG GAAACGGGTT
AATATTCCCG TACTTCTAGT TACTGCGATG GAGGGACGGA GAAGGCTAGG CCAGCACGGC
GTTGGTTGTC CGTGTTTAAG GTGGTAGGCT GATTTCTTAG GTAAATCCGG GAGATCAAGG
CCGAGAGCTG ATGACGAGCG TTCTTTTAGA ATGCGAAGTG GTTGATGCCA TGCTTCCAGG
AAAAGCTTCT AAGCTTCAGG TAACTAGGAA CCGTACCCCA AACCGACACA GGTGGTTAGG
TAGAGAATAC CAAGGCGCTT GAGAGAACTC GGGTGAAGGA ACTAGGCAAA ATGGCACCGT
AACTTCGGGA GAAGGTGCGC CGGTGAGGGT GAAGTATTTA CTACGTAAGC CCATGCCGGT
CGAAGATACC AGGCCGCTGC GACTGTTTAT TAAAAACACA GCACTCTGCA AACACGAAAG
TGGACGTATA GGGTGTGACG CCTGCCCGGT GCCGGAAGGT TAATTGATGG GGTTAGCGCA
AGCGAAGCTC TTGATCGAAG CCCCGGTAAA CGGCGGCCGT AACTATAACG GTCCTAAGGT
AGCGAAATTC CTTGTCGGGT AAGTTCCGAC CTGCACGAAT GGCGTAACGA TGGCGGCGCT
GTCTCCACCC GAGACTCAGT GAAATTGAAA TCGCTGTGAA GATGCAGTGT ATCCGCGGCT
AGACGGAAAG ACCCCGTGAA CCTTTACTAT AGCTTTGCAC TGGACTTTGA GCTTGCTTGT
GTAGGATAGG TGGGAGGCTT TGAAGTGGGG ACGCCAGTTC TCATGGAGCC ATCCTTGAAA
TACCACCCTG GCAACCTTGA GGTTCTAACT CTGGTCCGTC ATCCGGATCG AGGACAGTGT
ATGGTGGGTA GTTTGACTGG GGCGGTCTCC TCCCAAAGAG TAACGGAGGA GTACGAAGGT
GCGCTCAGAC CGGTCGGAAA TCGGTCGTAG AGTATAAAGG CAAAAGCGCG CTTGACTGCG
AGACAGACAC GTCGAGCAGG TACGAAAGTA GGTCTTAGTG ATCCGGTGGT TCTGTATGGA
AGGGCCATCG CTCAACGGAT AAAAGGTACT CCGGGGATAA CAGGCTGATA CCGCCCAAGA
GTTCATATCG ACGGCGGTGT TTGGCACCTC GATGTCGGCT CATCACATCC TGGGGCTGAA
GCCGGTCCCA AGGGTATGGC TGTTCGCCAT TTAAAGTGGT ACGCGAGCTG GGTTTAGAAC
GTCGTGAGAC AGTTCGGTCC CTATCTGCCG TGGACGTTTG AGATTTGAGA GGGGCTGACC
TTAGTACGAG AGGACCGGGT TGGACGAACC TCTGGTGTTC CGGTTGTCAC GCCAGTGGCA
CTGCCGGGTA GCTATGTTCG GAAAAGATAA CCGCTGAAAG CATCTAAGCG GGAAACTTGC
CTCAAGATGA GATCTCACTG GAGCCTTGAG CTCCCTGAAG GGCCGTCGAA GACTACGACG
TTGATAGGTG GGGTGTGTAA GCGCTGTGAG GCGTTGAGCT AACCCATACT AATTGCCCGT
GAGGCTTGAC CATATAACAC CCA
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| Protein sequence | |
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