| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4618 |
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| Symbol | |
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| ID | 5106928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 5065802 |
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| End bp | 5067694 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505888 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_001190096 |
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| Protein GI | 146309631 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATTTCC CTTCCCGTTT TGACGTGATC GTGATCGGCG GCGGTCATGC CGGTACCGAG
GCAGCCCTGG CTGCAGCACG CATGGGCGTG AAGACCCTGC TGCTCACCCA CAATGTCGAG
ACCCTCGGCC AGATGAGCTG CAACCCGGCC ATCGGTGGTA TCGGCAAGAG CCATCTGGTC
AAGGAAATCG ATGCCCTCGG CGGGGCCATG GCCACTGCCA CCGACAAGGG CGGGATCCAG
TTCCGTATCC TCAACAGCCG CAAGGGTCCG GCCGTTCGCG CCACTCGTGC CCAGGCCGAC
CGCGTGCTGT ACAAGGCCGC GGTACGCGAG ATCCTGGAAA ACCAGGCCAA TCTGTGGATT
TTTCAACAGG CAGCCGATGA CCTGATTGTG GAAAACGCCC AGGTCAAAGG CGTCGTCACC
CAGATGGGGC TCAGGTTCCA TGCGGATTCC GTGGTGTTGA CCACAGGCAC CTTCCTCGGC
GGACTTATCC ACATCGGTCT GCAGAACTAC TCCGGCGGCC GTGCTGGTGA TCCGCCCTCC
ATGGCTCTGG CGCATCGCCT GCGTGAACTG CCACTGCGGG TTGGCCGCCT GAAGACCGGT
ACACCGCCAC GCATCGATGG CCGCTCTGTG GATTTCTCGG TGATGACCGA GCAACCGGGC
GATACCCCGA CGCCGCTGAT GTCCTTTCTC GGCAAGCGTG AGCATCAGCC CAAGCAGATC
AGCTGCTGGA TCACTCACAC CAACGCGCGC ACCCACGAGA TCATCGCCGC CAACCTCGAC
CGCTCGCCGA TGTATTCCGG TGTCATCGAA GGCGTCGGTC CGCGTTACTG CCCGTCGATC
GAGGACAAGA TCCACCGCTT CGCCGACAAG GACAGCCACC AGGTATTCAT CGAGCCCGAG
GGGCTGACCA CCCACGAGCT GTATCCCAAC GGCATCTCTA CTTCGCTGCC GTTCGACGTG
CAGCTGCAGA TCGTGCGCAG CATCCGCGGC ATGGAGAACG CCCATATCGT GCGTCCCGGC
TACGCCATCG AGTATGACTA CTTCGATCCG CGTGATCTCA AGTACAGCCT GGAGACCAAG
GTCATCGGCG GGCTGTTCTT CGCCGGGCAG ATCAATGGCA CCACCGGCTA CGAAGAAGCC
GGCGCCCAGG GCCTGCTGGC CGGCTGCAAC GCGGCCTTGC GCGCGCAGGG CAAGGAAGCC
TGGTGCCCGC GGCGTGACGA GGCCTATATC GGCGTGCTGG TCGACGACCT GATCACCCTG
GGCACCCAGG AGCCGTACCG CATGTTCACC TCGCGCGCCG AATACCGGCT GATCCTGCGC
GAGGACAATG CCGACCTGCG CCTGACCGAG AAGGGCCGCG AGCTGGGCCT GGTGGACGAC
GAGCGCTGGG CCGCCTTCGA GGCCAAGCGC GAAGGCATCG TCCGGGAAGA GCAACGCCTG
AAGAGCACCT GGGTGCGCCC GGGCACGCCG CAGGGCGATG CCATCGCTGC GCGCTTCGGC
ACGCCGCTGG CCCACGAGTA CAACCTGCTC AACCTGCTCG CTCGCCCGGA GATCGATTAC
GCGGCCCTGG CGGAAATCAC CGAATCTCCG GCTGTGGATA ACCAGGTGGC CGAGCAGGTC
GAGATCAAGA CCAAGTACGC CGGCTACATC GACCGTCAGC AGGACGAGAT CGCCAGGCTG
CGGGCCAGCG AGGACACCAA GCTGCCGGAA GACCTGGACT ACAGCGCCAT TTCCGGCCTG
TCCAAGGAGA TCCAGTTCAA GCTCGGCAAC ACCCGCCCGG CCACGCTCGG CCAGGCCGGC
CGCATCCCCG GGGTCACCCC GGCGGCGATA TCCCTGTTGC TGATTCACCT GAAAAAGCGC
AGCGCCGGTC AGAAGCTGGA GCAGAGCGCC TGA
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| Protein sequence | MDFPSRFDVI VIGGGHAGTE AALAAARMGV KTLLLTHNVE TLGQMSCNPA IGGIGKSHLV
KEIDALGGAM ATATDKGGIQ FRILNSRKGP AVRATRAQAD RVLYKAAVRE ILENQANLWI
FQQAADDLIV ENAQVKGVVT QMGLRFHADS VVLTTGTFLG GLIHIGLQNY SGGRAGDPPS
MALAHRLREL PLRVGRLKTG TPPRIDGRSV DFSVMTEQPG DTPTPLMSFL GKREHQPKQI
SCWITHTNAR THEIIAANLD RSPMYSGVIE GVGPRYCPSI EDKIHRFADK DSHQVFIEPE
GLTTHELYPN GISTSLPFDV QLQIVRSIRG MENAHIVRPG YAIEYDYFDP RDLKYSLETK
VIGGLFFAGQ INGTTGYEEA GAQGLLAGCN AALRAQGKEA WCPRRDEAYI GVLVDDLITL
GTQEPYRMFT SRAEYRLILR EDNADLRLTE KGRELGLVDD ERWAAFEAKR EGIVREEQRL
KSTWVRPGTP QGDAIAARFG TPLAHEYNLL NLLARPEIDY AALAEITESP AVDNQVAEQV
EIKTKYAGYI DRQQDEIARL RASEDTKLPE DLDYSAISGL SKEIQFKLGN TRPATLGQAG
RIPGVTPAAI SLLLIHLKKR SAGQKLEQSA
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