Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4617 |
Symbol | gidB |
ID | 5106927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 5065158 |
End bp | 5065802 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640505887 |
Product | 16S rRNA methyltransferase GidB |
Protein accession | YP_001190095 |
Protein GI | 146309630 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGTCA CTCAGCGTCA CGCCGAAGAA CTGCTGCAGG GCGCTCGCGA GCTGGGCATC GAGCTCAGCG AGCGGCAGCA GGAACAACTG CTCGCCTACC TGGGCCTGCT GATCAAGTGG AACAAGGCCT ACAACCTCAC CGCGGTGCGC GACCCGGACG AAATGGTGTC GCGCCATCTG CTCGACAGCC TGTCGGTGGT GCCGTTCGTG GCCGAGCGAG GGGATAACTG GCTGGATGTC GGCAGTGGCG GCGGCATGCC CGGTATTCCC CTGGCGATCA TGTTTCCCGA GCGGCGTTTC ACCCTGCTCG ACTCCAACGG CAAGAAGACC CGTTTTCTGG TCCAGGTGAA GCTGGAGCTG AAACTCGCCA ACCTAGAGGT GGTCCACAGC CGGGTCGAAA CCTATCGCCC CGAGCAGCCG TTCGACGGCA TCAGCTCGCG GGCCTTCAGC AGCCTGCAGG ACTTCAGCGA CTGGACCCGC CACCTGGGCA GTGCCGATAC CCACTGGCTG GCCATGAAGG GCTTGCACCC GGGCGACGAG CTGCAGGCCC TGCCGGCGGA CTTCCGTCTC GATGCCACCC ATGTGCTGCG GGTTCCCGGT TGCCAAGGCC AGCGCCATCT GTTGATACTG CGTCGCTCGG TCTAA
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Protein sequence | MSVTQRHAEE LLQGARELGI ELSERQQEQL LAYLGLLIKW NKAYNLTAVR DPDEMVSRHL LDSLSVVPFV AERGDNWLDV GSGGGMPGIP LAIMFPERRF TLLDSNGKKT RFLVQVKLEL KLANLEVVHS RVETYRPEQP FDGISSRAFS SLQDFSDWTR HLGSADTHWL AMKGLHPGDE LQALPADFRL DATHVLRVPG CQGQRHLLIL RRSV
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