Gene Pmen_4611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4611 
Symbol 
ID5106921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp5061264 
End bp5061734 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content59% 
IMG OID640505881 
ProductATP synthase F0, B subunit 
Protein accessionYP_001190089 
Protein GI146309624 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATTA ACCTGACCCT GTTCGGTCAA ACGATTGCCT TCGCTATTTT CGTCTGGTTC 
TGCATGAAGT TCGTATGGCC GCCGCTGACG CAGGCCATGC AGGAACGCCA GAAGAAAATC
GCAGAAGGTC TGGATGCTGC CGGGCGCGCC GAGCGCGATC TGCAGTTGGC CCAGGAACGC
GCTGCCCAGA TGCTTCGTGA AACCAAAGAG CAAGCTGCCG AGATTCTCGA CCGGGCGAAC
AAGACCGCCA ACGCAATCGT CGAAGAAGCC AAGGCTCAGG CCCGCTCCGA AGGTGAAAAG
CTGATCGCTG GCGCCAAAGC CGAAATCGAT CTGGAAGTGA ACCGTGCCAA GGATCAACTG
CGTGCACAGG TAGCAGCTCT GGCTGTCACC GGCGCCGAGC AGATCCTGCA GTCCACCGTG
GACGGCGCTG CGCACAACGA TCTGGTCGCA AAACTGGCCT CTCAACTCTA A
 
Protein sequence
MNINLTLFGQ TIAFAIFVWF CMKFVWPPLT QAMQERQKKI AEGLDAAGRA ERDLQLAQER 
AAQMLRETKE QAAEILDRAN KTANAIVEEA KAQARSEGEK LIAGAKAEID LEVNRAKDQL
RAQVAALAVT GAEQILQSTV DGAAHNDLVA KLASQL