| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4607 |
|---|
| Symbol | |
|---|
| ID | 5106917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 5056819 |
|---|
| End bp | 5058195 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640505877 |
|---|
| Product | F0F1 ATP synthase subunit beta |
|---|
| Protein accession | YP_001190085 |
|---|
| Protein GI | 146309620 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCG GACGTATCGT TCAAATCATC GGCGCCGTTA TCGACGTGGA ATTCCCGCGC
GATCAGGTGC CGAACGTATA CGAAGCCCTG AAGGTACAGG GCGCTGAAAC CACCCTGGAA
GTCCAGCAGC AGTTGGGCGA CGGCGTGGTA CGTACCATTG CCATGGGTTC GACCGAAGGC
CTCAAGCGTG GCCTGGACGT CAACAGCACT GGCAAGGCCA TCTCCGTACC GGTCGGTAAA
GCGACCCTGG GCCGGATCAT GGACGTGCTG GGCAACCCGA TCGACGAAGC CGGCCCCATC
GGTGAAGAAG AGCAGTGGGA AATCCACCGC GCTGCACCGA GCTACGCCGA GCAAGCCGGT
GGCAACGACC TGCTGGAAAC CGGCATCAAG GTTATTGACC TGGTTTGCCC GTTCGCCAAG
GGCGGTAAGG TCGGTCTGTT CGGTGGCGCC GGTGTCGGCA AGACCGTGAA CATGATGGAA
CTGATCCGTA ACATCGCCAT CGAGCACAGC GGTTATTCCG TGTTCGCCGG TGTGGGTGAG
CGTACTCGTG AGGGTAACGA CTTCTACCAC GAGATGAAGG ACTCCAACGT TCTCGACAAG
GTAGCCCTGG TCTACGGTCA GATGAACGAG CCACCAGGCA ACCGTCTGCG CGTCGCGCTG
ACCGGCCTGA CCATGGCCGA GAAGTTCCGT GACGAAGGTC GTGACGTTCT GCTGTTCGTC
GACAACATCT ACCGTTACAC CCTCGCCGGT ACCGAAGTAT CCGCACTGCT CGGCCGTATG
CCGTCGGCAG TAGGTTACCA GCCGACCCTG GCCGAAGAGA TGGGCGTTCT GCAGGAGCGT
ATTACCTCCA CCAAGAAAGG CTCCATTACT TCGATCCAGG CCGTCTACGT ACCTGCGGAC
GACCTGACCG ACCCGAGCCC GGCGACCACC TTCGCCCACT TGGACGCCAC TGTCGTACTG
AGCCGTGACA TCGCTTCCCT GGGTATCTAC CCGGCCGTTG ACCCGCTGGA CTCCACCAGC
CGTCAGCTGG ACCCGAACGT GATCGGCCAG GAGCACTACG AGACCGCACG TGGCGTTCAG
TATGTTCTGC AGCGCTACAA GGAGCTGAAG GACATCATCG CGATCCTGGG TATGGACGAA
CTGTCCGAAG ACGACAAGCT GCTGGTAGCG CGCGCTCGTA AGATCCAGCG CTTCCTGTCC
CAGCCGTTCT TCGTGGCTGA AGTCTTCACC GGTGCCCCGG GCAAGTACGT GTCCCTGAAG
GACACCATTG CCGGCTTCAG CGGCATTCTC AAAGGCGACT ACGACCACCT GCCGGAACAA
GCGTTCTACA TGGTAGGCGG CATCGACGAA GCCATCGAGA AAGCCAAGAA ACTGTAA
|
|---|
| Protein sequence | MSSGRIVQII GAVIDVEFPR DQVPNVYEAL KVQGAETTLE VQQQLGDGVV RTIAMGSTEG
LKRGLDVNST GKAISVPVGK ATLGRIMDVL GNPIDEAGPI GEEEQWEIHR AAPSYAEQAG
GNDLLETGIK VIDLVCPFAK GGKVGLFGGA GVGKTVNMME LIRNIAIEHS GYSVFAGVGE
RTREGNDFYH EMKDSNVLDK VALVYGQMNE PPGNRLRVAL TGLTMAEKFR DEGRDVLLFV
DNIYRYTLAG TEVSALLGRM PSAVGYQPTL AEEMGVLQER ITSTKKGSIT SIQAVYVPAD
DLTDPSPATT FAHLDATVVL SRDIASLGIY PAVDPLDSTS RQLDPNVIGQ EHYETARGVQ
YVLQRYKELK DIIAILGMDE LSEDDKLLVA RARKIQRFLS QPFFVAEVFT GAPGKYVSLK
DTIAGFSGIL KGDYDHLPEQ AFYMVGGIDE AIEKAKKL
|
|---|
| |