| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4594 |
|---|
| Symbol | |
|---|
| ID | 5106905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 5041839 |
|---|
| End bp | 5042993 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640505865 |
|---|
| Product | iron-containing alcohol dehydrogenase |
|---|
| Protein accession | YP_001190073 |
|---|
| Protein GI | 146309608 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCAA TCATTCTGCC CAGAGTCCTC GAAGTCGGTT CCGGTGCGAT ACAGAAACTG
CCCGATCTGC TGGCGACCCT GGCCTGCAGC AGGCCACTGA TCATCACCGA CAAGATGATG
GTCAAGCTGG GCTACAGCGA CCGCATCCAG ACCGTACTCA GCGCCAATGG CATCGACAGC
GAAGTATTCG ATGACACCGT GCCTGAGCCG ACTGCCGCCT CGATCCAGGC TGGTGTCGAC
AAGGTTCGCC AGGGCAACTA CGACGCCATC GTCGCGCTTG GCGGCGGCAG CCCGATCGAC
AGCGCCAAGG CCATCGCTAT CCTCGGCAAG TTCGGTGGTG AGATTCGCGA CTACCGTTTC
CCGCGTCAGG TCAACGAAAC CGGCCTGCCG ATCATCGCGG TGCCGACGAC CGCTGGAACC
GGTTCGGAGG TGACCCGATT CACCATCATC ACCGACGAGA AGAACGACGA AAAAATGCTC
TGCGTCGGCA TCGGCTTCAT GCCCGTCGCC GCACTGGTCG ACTACAGCCT GACGCTCAGC
CTGCCCCCGC GTGTGACGGC CGATACAGGC CTCGACGCCC TTACTCACGC CATCGAGGCT
TACGTCAGCC AGAAGGCCAA CCTCTACAGC AACAGCCAGG CGTTGGCGGC CATGCGCCTG
ATCGGCCCCA ATCTGCGTCG CGCCTACCAC GACGGCTCCG ACAAGGAAGC GCGCGAAGCC
ATGATGCTTG GCTCGACGCT CGCCGGCGTC GCTTTTTCCA GTGCCTCGGT TGCGCTGGTA
CACGGTATGA GCCGCCCGAT CGGCGCCTTC TTCCATGTGC CGCATGGGCT ATCCAACGCC
ATGCTGCTGC CCAGCATCAC GGCCTTCTCC ATCCCAGCAG CGGCTGAGCG ATATGCCGAC
TGCGCACGGG CCATAGGCGT TGCCAGCGAG CAGGACAGCG CCGAGCAGGC CAACGCCAAG
CTTCTTGCTG AACTGCGCGC CCTCAATGAA GAACTTCAGG TACCGACACC GGAGCAGTTC
GGTATCGACC GTGAGCGTTT TTTCGAGCTG ATGCCGACCA TGGCGCAACA GGCGCTCGCT
TCGGGTTCAC CGGGTAATAA CCCCCGGGTG CCCACGGTGG AACAAATGGT CGAGCTCTAC
AGCAGCCTTT GGTAA
|
|---|
| Protein sequence | MASIILPRVL EVGSGAIQKL PDLLATLACS RPLIITDKMM VKLGYSDRIQ TVLSANGIDS
EVFDDTVPEP TAASIQAGVD KVRQGNYDAI VALGGGSPID SAKAIAILGK FGGEIRDYRF
PRQVNETGLP IIAVPTTAGT GSEVTRFTII TDEKNDEKML CVGIGFMPVA ALVDYSLTLS
LPPRVTADTG LDALTHAIEA YVSQKANLYS NSQALAAMRL IGPNLRRAYH DGSDKEAREA
MMLGSTLAGV AFSSASVALV HGMSRPIGAF FHVPHGLSNA MLLPSITAFS IPAAAERYAD
CARAIGVASE QDSAEQANAK LLAELRALNE ELQVPTPEQF GIDRERFFEL MPTMAQQALA
SGSPGNNPRV PTVEQMVELY SSLW
|
|---|
| |