| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4593 |
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| Symbol | |
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| ID | 5106904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 5040276 |
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| End bp | 5041772 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640505864 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001190072 |
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| Protein GI | 146309607 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.314497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAG TAGGACACCT GATCAACGGC CAGATCGTCA GCGACGCTAC TCGCCTGCAG
GACGTGTACA ACCCCTCCAC CGGCGAAGTC AGCAAGCAAG TGGCGCTGGC GTCCACTAGC
ACCGTCGAGC AGGCCATTGC CGCTGCCGAA GCCGCTTTCC CGGAATGGCG CAATACGCCG
CCGATCAAGC GTGCGCGGGT CATGTTCCGC TTCAAGGAGT TGCTGGAGCA GAACGCCGAC
CGCATCGCTC AGATGATCGG CGAAGAGCAC GGCAAGATCG CCCATGACGC GCTGGGTGAA
CTGCAGCGCG GCATCGAGAA CGTTGAATAC GCGTGCGGTG CACCCGAGCT GCTCAAGGGC
GAGCACAGCA AGAACGTCGG CCCGAACATC GACTCCTGGA GTGAATTCCA GCCGTTGGGC
GTGGTGGCCG GTATCACCCC GTTCAACTTC CCGGTGATGG TGCCGCTGTG GATGTTCCCG
ATGGCCATCG TCTGCGGCAA CTGCTTCATC CTCAAGCCGT CCGAGCGTGA CCCCAGTTCC
ACACTGTTCA TCGCGCAACT GCTGCAGGAA GCTGGTCTGC CGAAAGGTGT GATGAACGTG
GTCAACGGTG ACAAGGAAGC AGTCGACGTG CTGCTGCGCG ACCCGCGCAT CCAGGCGGTC
AGCTTCGTCG GTTCGACCCC GATCGCCGAG TACATCTACA AGACCGCCAA TGCCAACGGC
AAGCGCTGCC AGGCCCTGGG CGGCGCCAAG AACCACGCCA TCGTGATGCC CGACGCTGAC
ATGGACAACG CCGTCAGCCA ACTGCTGGGT GCGGCCTTCG GCTCCTCCGG TGAGCGTTGC
ATGGCGCTGT CCGTTGCCGT TGCGGTAGGC GATGCCGCTG CCGATGCGCT GATCGAGAAG
ATGCAGGCTG CCATGCAGTC GCTGAAAGTC GGTGCCTACT CGGACAAGAA CAACGACTTC
GGTCCGGTGA TCACCAAGGC TCATCAGCAA AAGGTCGTTG GCTACATCAA CAGTGCCGAA
GAGCAGGGGG CGACCATCGT GGTCGACGGC CGCAAGCCAC AGGTCGCGGG CTACGAAAAC
GGCTTCTTCG TTGGCGGTAC GCTGATCGAC GGTGTGAAAC CGGACATGCT CAGCTACAAG
GAAGAGATCT TCGGCCCGGT ACTGCAGGTC GTGCGGGTGG ACAGCATGCA GGCCGCGATG
GATCTGATCG ATGCCCACGA GTACGGCAAC GGCACTTGCA TCTTCACCCG TGATGGCGAG
GCTGCACGTT ACTTCTCCGA CAACATCAAG GTCGGCATGG TCGGCATCAA CGTACCACTG
CCGGTACCGG TGGCCTATCA CAGCTTCGGT GGCTGGAAGC GTTCGCTGTT CGGTGACCTA
CACGCCTATG GCCCGGATGC GGTTCGCTTC TACACCAAGC GCAAGACTGT TACTCAGCGC
TGGCCGTCGG CCGGTGTGCG AGAGAGCGTT TCGTTCTCCA TGCCCACGAT GAAGTAA
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| Protein sequence | MNTVGHLING QIVSDATRLQ DVYNPSTGEV SKQVALASTS TVEQAIAAAE AAFPEWRNTP
PIKRARVMFR FKELLEQNAD RIAQMIGEEH GKIAHDALGE LQRGIENVEY ACGAPELLKG
EHSKNVGPNI DSWSEFQPLG VVAGITPFNF PVMVPLWMFP MAIVCGNCFI LKPSERDPSS
TLFIAQLLQE AGLPKGVMNV VNGDKEAVDV LLRDPRIQAV SFVGSTPIAE YIYKTANANG
KRCQALGGAK NHAIVMPDAD MDNAVSQLLG AAFGSSGERC MALSVAVAVG DAAADALIEK
MQAAMQSLKV GAYSDKNNDF GPVITKAHQQ KVVGYINSAE EQGATIVVDG RKPQVAGYEN
GFFVGGTLID GVKPDMLSYK EEIFGPVLQV VRVDSMQAAM DLIDAHEYGN GTCIFTRDGE
AARYFSDNIK VGMVGINVPL PVPVAYHSFG GWKRSLFGDL HAYGPDAVRF YTKRKTVTQR
WPSAGVRESV SFSMPTMK
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