Gene Pmen_4588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4588 
Symbol 
ID5106899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp5037217 
End bp5037645 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content63% 
IMG OID640505859 
Productcobalamin (vitamin B12) biosynthesis CbiG protein 
Protein accessionYP_001190067 
Protein GI146309602 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2073] Cobalamin biosynthesis protein CbiG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000406351 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA GCCACCTAGA TCCCCCCGCC GCCATGGTGG TTGCCGGCCT AGGCTGTCGG 
CGTGGTTGTG CACAGGACGA ATTGCTCGAT CTGCTGACCC ACAGCCTGGC TCGGCATGAG
CTGACGGTGG ACAACCTTGC CGGCCTGGCC AGCATCGCCC TAAAGCGCGA CGAAACCGGC
CTGCATGTCC TGGCCGAGCA TTTGGGCCTG GAGTTGGTGT TCTTCGCCCC AGAGCAACTG
AACACCTATC AAGCCATGGC AATCGGCAAT TCATTGGCCC TGGCAGCTAC AGGCAGCCCT
GCCGTAGCCG AGCCTTGCGC ACTGGCACTG GCAGCGCGCA TGGGCGCATC GCCCTGCCTG
CTCGGCGAGA AAAACCGCAG TGCCAGCGCC ACTTGCGCGC TGGCCACCTT CGATAGAGAA
CTTACATGA
 
Protein sequence
MTASHLDPPA AMVVAGLGCR RGCAQDELLD LLTHSLARHE LTVDNLAGLA SIALKRDETG 
LHVLAEHLGL ELVFFAPEQL NTYQAMAIGN SLALAATGSP AVAEPCALAL AARMGASPCL
LGEKNRSASA TCALATFDRE LT